RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
TSFM-208ENST00000543727 ZFHX2Q9C0A1 2572 aaPredicted RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 LRRC72A6NJI9 287 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 BNIP3LO60238 219 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 POP4O95707 220 aaKnown RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 KRT1P04264 644 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 MX2P20592 715 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 DHPSP49366 369 aaPredicted RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 RENBPP51606 427 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 NAP1L1P55209 391 aaKnown RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 RHOAP61586 193 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 ZNF33AQ06730 810 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 MMRN1Q13201 1228 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 WDR45BQ5MNZ6 344 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 PEAR1Q5VY43 1037 aaPredicted RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 NCBP2-AS2Q69YL0 99 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 TIGD7Q6NT04 549 aaPredicted RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 ALYREFQ86V81 257 aaKnown RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 KATNAL2Q8IYT4 538 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 BBS5Q8N3I7 341 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 HDDC3Q8N4P3 179 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
TSFM-208ENST00000543727 AADATQ8N5Z0 425 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 FRMD1Q8N878 549 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 PCDH19Q8TAB3 1148 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 KIAA1524Q8TCG1 905 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 GANCQ8TET4 914 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 RAPGEF5Q92565 580 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 TNKS2Q9H2K2 1166 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 CD93Q9NPY3 652 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 SALL4Q9UJQ4 1053 aa18.18■□□□□ 0.5
TSFM-208ENST00000543727 PI4KAP42356 2102 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 A0A1W2PP55 124 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 C3orf70A6NLC5 250 aaPredicted RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 KRT86O43790 486 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 PALMO75781 387 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 RNASEH2AO75792 299 aaKnown RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 CTSLP07711 333 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 ITGB7P26010 798 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 DRD3P35462 400 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 MPLP40238 635 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 MAPK8P45983 427 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 CSNK1DP48730 415 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 DNA2P51530 1060 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 NSUN2Q08J23 767 aaKnown RBP eCLIP18.17■□□□□ 0.5
TSFM-208ENST00000543727 GALNT2Q10471 571 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 CSRP2Q16527 193 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 PLA2G2CQ5R387 149 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 SLC9A4Q6AI14 798 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 ZNF662Q6ZS27 426 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 SYT12Q8IV01 421 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 TMEFF1Q8IYR6 380 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 OR2T34Q8NGX1 318 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 NSMCE1Q8WV22 266 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 RBM41Q96IZ5 413 aaKnown RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 GPR174Q9BXC1 333 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 MAK16Q9BXY0 300 aaKnown RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 HDAC8Q9BY41 377 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 SUSD2Q9UGT4 822 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 SEPT3Q9UH03 358 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 SARDHQ9UL12 918 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 ADGRG1Q9Y653 693 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 WASF2Q9Y6W5 498 aa18.17■□□□□ 0.5
TSFM-208ENST00000543727 RIF1Q5UIP0 2472 aaKnown RBP18.17■□□□□ 0.5
TSFM-208ENST00000543727 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 METTL12A8MUP2 240 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 J3KR12 359 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 MFSD11O43934 449 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 MAFKO60675 156 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 LEFTY1O75610 366 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 ACSL1P33121 698 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
TSFM-208ENST00000543727 NUDT1P36639 197 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 GARSP41250 739 aaKnown RBP18.16■□□□□ 0.5
TSFM-208ENST00000543727 ADPRHP54922 357 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 COPS2P61201 443 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 CREB5Q02930 508 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 TFDP2Q14188 446 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 TAZQ16635 292 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 RALGPS1Q5JS13 557 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 RCOR2Q8IZ40 523 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 PQLC3Q8N755 202 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 CEP76Q8TAP6 659 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 HCAR2Q8TDS4 363 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 DNASE2BQ8WZ79 361 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 HSPA12BQ96MM6 686 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 TSGA13Q96PP4 275 aa18.16■□□□□ 0.5
TSFM-208ENST00000543727 PSKH2Q96QS6 385 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms