RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 CHST14Q8NCH0 376 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 P3H4Q92791 437 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 GDAP1L1Q96MZ0 367 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 HEPHQ9BQS7 1158 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 TLR10Q9BXR5 811 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 ITM2CQ9NQX7 267 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 USP36Q9P275 1121 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 HECAQ9UBI9 543 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 SEPT3Q9UH03 358 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 PPM1HQ9ULR3 514 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 SCML1Q9UN30 329 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 APOC4-APOC2K7ER74 178 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PPP1R12AO14974 1030 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 MATN3O15232 486 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 HRO43593 1189 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 KIF5CO60282 957 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 TJP3O95049 919 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 IGSF6O95976 241 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ADH1BP00325 375 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 IL1BP01584 269 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 APOC2P02655 101 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PRNPP04156 253 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ACADMP11310 421 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 SLC8A1P32418 973 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PSMD8P48556 350 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ZNF33AQ06730 810 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PPIDQ08752 370 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 HNRNPDQ14103 355 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 MAP7D1Q3KQU3 841 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ZNF569Q5MCW4 686 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ATXN7L2Q5T6C5 722 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 MARC1Q5VT66 337 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 CCNYQ8ND76 341 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 TMIEQ8NEW7 156 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 GAB3Q8WWW8 586 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 MAML1Q92585 1016 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 ATOH1Q92858 354 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PSKH2Q96QS6 385 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 CINPQ9BW66 212 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 BRD8Q9H0E9 1235 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 CARD9Q9H257 536 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 PABPC3Q9H361 631 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 SAE1Q9UBE0 346 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 IL36AQ9UHA7 158 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 SARDHQ9UL12 918 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
RABGGTA-203ENST00000543002 C1QTNF3-AMACRE9PGA6 284 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 MID1O15344 667 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 RPP40O75818 363 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 POP4O95707 220 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 IGLV3-19P01714 112 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 CTSLP07711 333 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 C5AR1P21730 350 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 TPMTP51580 245 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 RENBPP51606 427 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 MYLK3Q32MK0 819 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 TTC31Q49AM3 519 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 SEL1L2Q5TEA6 688 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 CCDC181Q5TID7 509 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 FAM46CQ5VWP2 391 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 CCDC13Q8IYE1 715 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 BBS5Q8N3I7 341 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 RYBPQ8N488 228 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 TEX26Q8N6G2 289 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 PIP4K2CQ8TBX8 421 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 LRRN4Q8WUT4 740 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 RLN3Q8WXF3 142 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 LRIG1Q96JA1 1093 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 SPACA7Q96KW9 195 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 LGMNQ99538 433 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 CD93Q9NPY3 652 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 KCND1Q9NSA2 647 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 JRKLQ9Y4A0 524 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 ARIH1Q9Y4X5 557 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 WASF2Q9Y6W5 498 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 R4GN57 208 aa17.37■□□□□ 0.37
RABGGTA-203ENST00000543002 FANCMQ8IYD8 2048 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 IGHV1OR15-9A0A0B4J2B8 117 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 MSNP26038 577 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 HSPA9P38646 679 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 MMP13P45452 471 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 CSNK1DP48730 415 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 RAD51Q06609 339 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 NSUN2Q08J23 767 aaKnown RBP eCLIP17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 SFSWAPQ12872 951 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 SRSF5Q13243 272 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 ZNF235Q14590 738 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 NOMO1Q15155 1222 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 ARSIQ5FYB1 569 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 USP30Q70CQ3 517 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 SLC35F6Q8N357 371 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 OR6K2Q8NGY2 324 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 GRIN3AQ8TCU5 1115 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 VOPP1Q96AW1 172 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 HAUS1Q96CS2 278 aa17.36■□□□□ 0.37
RABGGTA-203ENST00000543002 EXOC2Q96KP1 924 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms