RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 XKR9Q5GH70 373 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CLEC17AQ6ZS10 378 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 USP45Q70EL2 814 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 SERINC5Q86VE9 423 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 ZNF410Q86VK4 478 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CATSPER3Q86XQ3 398 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CCDC60Q8IWA6 550 aaPredicted RBP4.8□□□□□ -1.64
MDM2-228ENST00000542502 CEP57L1Q8IYX8 460 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 PRR18Q8N4B5 295 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 PSPC1Q8WXF1 523 aaKnown RBP4.8□□□□□ -1.64
MDM2-228ENST00000542502 KAT2BQ92831 832 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 APBB2Q92870 758 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 SCAMP4Q969E2 229 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CCDC47Q96A33 483 aaKnown RBP4.8□□□□□ -1.64
MDM2-228ENST00000542502 FKBP10Q96AY3 582 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CEP170P1Q96L14 293 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 IFT74Q96LB3 600 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 FTHL17Q9BXU8 183 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 TMEM60Q9H2L4 133 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 ARNT2Q9HBZ2 717 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CALCOCO1Q9P1Z2 691 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 LARSQ9P2J5 1176 aaKnown RBP4.8□□□□□ -1.64
MDM2-228ENST00000542502 HDAC6Q9UBN7 1215 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 ODF2LQ9ULJ1 636 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 CLIC4Q9Y696 253 aa4.8□□□□□ -1.64
MDM2-228ENST00000542502 EVPLQ92817 2033 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 A0A1W2PPC1 479 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 RSPH10B2B2RC85 870 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 MOSPD3O75425 235 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 KIF20AO95235 890 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 RSPH10BP0C881 870 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 CYP2C9P11712 490 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 CYP11B2P19099 503 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 KLRC1P26715 233 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 MARK3P27448 753 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 STAT6P42226 847 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 CRYBB1P53674 252 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 CEBPZQ03701 1054 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 ALCAMQ13740 583 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 BMPR2Q13873 1038 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 ARHGAP29Q52LW3 1261 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 RESP18Q5W5W9 173 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 SLC9A4Q6AI14 798 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 MTHFD1LQ6UB35 978 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 ZNF66Q6ZN08 573 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 STXBP4Q6ZWJ1 553 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 ANO5Q75V66 913 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 ZNF551Q7Z340 670 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 YTHDF3Q7Z739 585 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 PDSS2Q86YH6 399 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 METTL13Q8N6R0 699 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 SYT2Q8N9I0 419 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 DIS3LQ8TF46 1054 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 TIFAQ96CG3 184 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 MVB12AQ96EY5 273 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 CLPTM1LQ96KA5 538 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 PCYT2Q99447 389 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 NFKBIZQ9BYH8 718 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 GCOM2Q9BZD3 368 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 AMBRA1Q9C0C7 1298 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 C2orf40Q9H1Z8 148 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 TNMDQ9H2S6 317 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 DHX33Q9H6R0 707 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 ATP6V0A4Q9HBG4 840 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 DDX19AQ9NUU7 478 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 SETD4Q9NVD3 440 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 DKK3Q9UBP4 350 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
MDM2-228ENST00000542502 FBXO2Q9UK22 296 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 DDX49Q9Y6V7 483 aaKnown RBP4.79□□□□□ -1.64
MDM2-228ENST00000542502 MYH11P35749 1972 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 TRIP12Q14669 1992 aaPredicted RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 TNRC18O15417 2968 aaPredicted RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 GRIN2DO15399 1336 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 IGKV6-21A0A0C4DH24 114 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 FAM237AA0A1B0GTK4 181 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 KINO60870 393 aaKnown RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 TBCAO75347 108 aaKnown RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 JTBO76095 146 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 BAIAP3O94812 1187 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 KRT18P05783 430 aaKnown RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 PLA2G4BP0C869 781 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 GAP43P17677 238 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 SFPQP23246 707 aaKnown RBP eCLIP4.78□□□□□ -1.64
MDM2-228ENST00000542502 PCSK6P29122 969 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 MARCKSP29966 332 aaPredicted RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 AXLP30530 894 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 THPOP40225 353 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 SYKP43405 635 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 NAMPTP43490 491 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 UBE2HP62256 183 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 PSMC6P62333 389 aa4.78□□□□□ -1.64
MDM2-228ENST00000542502 MRPS6P82932 125 aaKnown RBP4.78□□□□□ -1.64
MDM2-228ENST00000542502 CYP4A11Q02928 519 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms