RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SSX5O60225 188 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 LGALS2P05162 132 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 CCNB1P14635 433 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 TNNI1P19237 187 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 IFITM2Q01629 132 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 CKAP4Q07065 602 aaKnown RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 SGCAQ16586 387 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SV2AQ7L0J3 742 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 OR6P1Q8NGX9 317 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 HLA-CQ95604 372 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 EXOC2Q96KP1 924 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 NT5C1BQ96P26 610 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 NUDCD1Q96RS6 583 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SMYD2Q9NRG4 433 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 RAB20Q9NX57 234 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 TAGLN3Q9UI15 199 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 BAG5Q9UL15 447 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 GNEQ9Y223 722 aaKnown RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 MYO7AQ13402 2215 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 LCHNA4D1U4 455 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 DDX3XO00571 662 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDX55-206ENST00000539934 EDN1P05305 212 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 MFAP3P55082 362 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 TFDP1Q14186 410 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 GRM2Q14416 872 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 MAPK6Q16659 721 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 RGS21Q2M5E4 152 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 FAM47CQ5HY64 1035 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 GLYCTKQ8IVS8 523 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
DDX55-206ENST00000539934 SEMA4DQ92854 862 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 VPS33AQ96AX1 596 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 ACAT2Q9BWD1 397 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
DDX55-206ENST00000539934 HAPLN2Q9GZV7 340 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 RNPEPQ9H4A4 650 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 RBAKQ9NYW8 714 aaPredicted RBP12.79□□□□□ -0.36
DDX55-206ENST00000539934 GTF2IRD1Q9UHL9 959 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 CPSF3Q9UKF6 684 aaKnown RBP12.79□□□□□ -0.36
DDX55-206ENST00000539934 NUP50Q9UKX7 468 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 ZNF175Q9Y473 711 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
DDX55-206ENST00000539934 CLDN3O15551 220 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 GATCO43716 136 aaKnown RBP12.78□□□□□ -0.36
DDX55-206ENST00000539934 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
DDX55-206ENST00000539934 ESRRBO95718 433 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 PRKCBP05771 671 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 ALOX12P18054 663 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 PHKA2P46019 1235 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 IFNAR2P48551 515 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 NKX2-5P52952 324 aaPredicted RBP12.78□□□□□ -0.36
DDX55-206ENST00000539934 COG7P83436 770 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 ECT2LQ008S8 904 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 CDC16Q13042 620 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 SLX4IPQ5VYV7 408 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 MREGQ8N565 214 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 GANCQ8TET4 914 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 KAT5Q92993 513 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 RANBP9Q96S59 729 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 EPS8L2Q9H6S3 715 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 A0A0B4J269 797 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 USP1O94782 785 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 CLCN3P51790 818 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 TBRG1Q3YBR2 411 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 CYP27C1Q4G0S4 372 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 ZNF484Q5JVG2 852 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 DCLRE1AQ6PJP8 1040 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 DDI1Q8WTU0 396 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 RMND5BQ96G75 393 aaPredicted RBP12.78□□□□□ -0.36
DDX55-206ENST00000539934 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms