RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IQCGQ9H095 443 aaKnown RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 VPS11Q9H270 941 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 PPARGC1AQ9UBK2 798 aaKnown RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 UXTQ9UBK9 157 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 HIDE1A8MVS5 230 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 AVPR1AP37288 418 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 NDST2P52849 883 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 RING1Q06587 406 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SERINC3Q13530 473 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 FSTL4Q6MZW2 842 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 TIGD7Q6NT04 549 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SPATA6LQ8N4H0 392 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 OTUD6BQ8N6M0 293 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 MAB21L3Q8N8X9 362 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 CDKL2Q92772 493 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SEMA3CQ99985 751 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 NPHS2Q9NP85 383 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 TXNDC16Q9P2K2 825 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 AAR2Q9Y312 384 aaKnown RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 USP1O94782 785 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 OAS1P00973 400 aaKnown RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 ARNTP27540 789 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 ADRA1AP35348 466 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SERPINB4P48594 390 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 ERVFC1P60507 584 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SMAD3P84022 425 aaKnown RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 TMPRSS15P98073 1019 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 GALNT3Q14435 633 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 GAREM2Q75VX8 874 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 TMEM199Q8N511 208 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 C20orf27Q9GZN8 174 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 IL22Q9GZX6 179 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 HCFC1R1Q9NWW0 138 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 SOX13Q9UN79 622 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
ACTN1-205ENST00000538545 MTF2Q9Y483 593 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 USP15Q9Y4E8 981 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-205ENST00000538545 OR51F1A6NGY5 319 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 H3BNC9 293 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 CBX4O00257 560 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 SNAP91O60641 907 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 LAG3P18627 525 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 GABRB3P28472 473 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 RAB33AQ14088 237 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
ACTN1-205ENST00000538545 SPANXN3Q5MJ09 141 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 KDELC1Q6UW63 502 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 RANBP10Q6VN20 620 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 WFDC5Q8TCV5 224 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 NUMBLQ9Y6R0 609 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ANXA9O76027 345 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 KIAA0754O94854 1291 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 SLC4A1P02730 911 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 MYOGP15173 224 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 KCNA4P22459 653 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 HOXD9P28356 352 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-205ENST00000538545 GABRR2P28476 465 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 RENBPP51606 427 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF789Q5FWF6 425 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 TNS4Q8IZW8 715 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ANKLE1Q8NAG6 615 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 RFWD2Q8NHY2 731 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ARRDC2Q8TBH0 407 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ADAMTS19Q8TE59 1207 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 CCT6BQ92526 530 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 ZFRQ96KR1 1074 aaKnown RBP14.32□□□□□ -0.12
ACTN1-205ENST00000538545 HERC2P3Q9BVR0 1158 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
ACTN1-205ENST00000538545 MANSC1Q9H8J5 431 aa14.32□□□□□ -0.12
ACTN1-205ENST00000538545 MARCOQ9UEW3 520 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-205ENST00000538545 FAM237BA0A1B0GVD1 139 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ERI2A8K979 691 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 EDF1O60869 148 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ARHGEF15O94989 841 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 GSTA2P09210 222 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 KITP10721 976 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 TYK2P29597 1187 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 SLC11A2P49281 568 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CORO7P57737 925 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 LBRQ14739 615 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 VEPH1Q14D04 833 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CCDC121Q6ZUS5 278 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 IMP4Q96G21 291 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 IL21Q9HBE4 155 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 EMCNQ9ULC0 261 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 HBS1LQ9Y450 684 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CPQQ9Y646 472 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CHD5Q8TDI0 1954 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 A0A1W2PRU2 124 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 TM9SF1O15321 606 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 PHGDHO43175 533 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms