RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SERGEFQ9UGK8 458 aa11.69□□□□□ -0.54
UBASH3B-208ENST00000533451 IL36AQ9UHA7 158 aa11.69□□□□□ -0.54
UBASH3B-208ENST00000533451 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
UBASH3B-208ENST00000533451 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 LRRC72A6NJI9 287 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 MCF2LO15068 1137 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 SPOPO43791 374 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 TMCC1O94876 653 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 AMPD1P23109 780 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 MAPK8P45983 427 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 ZNF135P52742 658 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 METAP1P53582 386 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CNTN1Q12860 1018 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 SERINC3Q13530 473 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 DPYSL2Q16555 572 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 ATXN7L2Q5T6C5 722 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 TXNRD3NBQ6F5E7 133 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 NCEH1Q6PIU2 408 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 DPY19L3Q6ZPD9 716 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CYP4V2Q6ZWL3 525 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 RABEPKQ7Z6M1 372 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 RHOT2Q8IXI1 618 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 UMODL1-AS1Q8N2C9 162 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 AADATQ8N5Z0 425 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 PCDH20Q8N6Y1 951 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CHST14Q8NCH0 376 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 OR2A12Q8NGT7 310 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 TEKT4Q8WW24 435 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 PPP1R16AQ96I34 528 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 GDAP1L1Q96MZ0 367 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 PANX2Q96RD6 677 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 GTPBP2Q9BX10 602 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 ACE2Q9BYF1 805 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 CEP44Q9C0F1 390 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 KLC2Q9H0B6 622 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 NEUROG2Q9H2A3 272 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 NOL6Q9H6R4 1146 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 TMEM74BQ9NUR3 256 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 HECAQ9UBI9 543 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 UBA2Q9UBT2 640 aaPredicted RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 SUSD2Q9UGT4 822 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 PILRBQ9UKJ0 227 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 SARDHQ9UL12 918 aa11.68□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3DA0A087WVF3 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3IA0A087WXS9 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3EA0A087X179 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3KA0A087X1G2 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3FA6NER0 549 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 PRR5-ARHGAP8B1AHC4 643 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3LB9A6J9 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 GDF9O60383 454 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 LEFTY1O75610 366 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 IGSF6O95976 241 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 KRT7P08729 469 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3HP0C7X1 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 PAPOLAP51003 745 aaKnown RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 NDST2P52849 883 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 ARHGAP8P85298 464 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 SLC25A11Q02978 314 aaKnown RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 DPYSQ14117 519 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 DUOXA1Q1HG43 343 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3GQ6DHY5 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3CQ6IPX1 549 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TMTC1Q8IUR5 882 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 CCDC170Q8IYT3 715 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 TBC1D3Q8IZP1 549 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 NPWQ8N729 165 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 CADM4Q8NFZ8 388 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 ZNF419Q96HQ0 510 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 EXOC2Q96KP1 924 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 CSPG4P5Q96PW8 444 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 HEPHQ9BQS7 1158 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 SLC39A8Q9C0K1 460 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 FSCN3Q9NQT6 498 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 PPM1HQ9ULR3 514 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 FZD4Q9ULV1 537 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 MFHAS1Q9Y4C4 1052 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 PCDHA13Q9Y5I0 950 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 MYO15AQ9UKN7 3530 aa11.67□□□□□ -0.54
UBASH3B-208ENST00000533451 LNP1A1A4G5 178 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 LRRD1A4D1F6 860 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 METTL12A8MUP2 240 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 J3KR12 359 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 PCDH8O95206 1070 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 GSRP00390 522 aa11.66□□□□□ -0.54
UBASH3B-208ENST00000533451 KRT1P04264 644 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms