RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 PTPN9P43378 593 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 STT3AP46977 705 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ATP5OP48047 213 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ME1P48163 572 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ALDH5A1P51649 535 aaPredicted RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 RAD23BP54727 409 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 DCDC1P59894 354 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 EEF1A1P68104 462 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 EEF1A2Q05639 463 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 RNASELQ05823 741 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 TBX2Q13207 712 aaPredicted RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 TRPC3Q13507 836 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 PLS1Q14651 629 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 DUSP7Q16829 419 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 LRRC36Q1X8D7 754 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 GTDC1Q4AE62 458 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CEP55Q53EZ4 464 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 GPR158Q5T848 1215 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 EEF1A1P5Q5VTE0 462 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ERAP2Q6P179 960 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 SYCE2Q6PIF2 218 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CATSPERGQ6ZRH7 1159 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 DCDC5Q6ZRR9 648 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 LCNL1Q6ZST4 164 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 USP43Q70EL4 1123 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 HAUS6Q7Z4H7 955 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 SLFN11Q7Z7L1 901 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ASPGQ86U10 573 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 FERMT3Q86UX7 667 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 RHPN2Q8IUC4 686 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 GSPT2Q8IYD1 628 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 SLC38A6Q8IZM9 456 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CCNYL1Q8N7R7 359 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TSPYL6Q8N831 410 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 LINC01356Q8N9X3 169 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 SPATA5Q8NB90 893 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 SYT8Q8NBV8 401 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ZNF461Q8TAF7 563 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ADAMTS16Q8TE57 1224 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 DENND1AQ8TEH3 1009 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 MYDGFQ969H8 173 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 VPS33AQ96AX1 596 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 RAD51AP1Q96B01 352 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 AHCYL2Q96HN2 611 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 SNX18Q96RF0 628 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TWNKQ96RR1 684 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 WRNIP1Q96S55 665 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 WACQ9BTA9 647 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TBCDQ9BTW9 1192 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TUBB6Q9BUF5 446 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 MLPHQ9BV36 600 aaPredicted RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 MXD3Q9BW11 206 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 BTBD2Q9BX70 525 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ZDHHC5Q9C0B5 715 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TWSG1Q9GZX9 223 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 DPH5Q9H2P9 285 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 SH2D4AQ9H788 454 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TLE6Q9H808 572 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CRLF2Q9HC73 371 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 TXLNGQ9NUQ3 528 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 INTS9Q9NV88 658 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 SELENONQ9NZV5 590 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 NYAP2Q9P242 653 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CPSF3Q9UKF6 684 aaKnown RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 VPS4AQ9UN37 437 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CARMIL3Q8ND23 1372 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 IQSEC2Q5JU85 1478 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 ADGRB3O60242 1522 aa5.62□□□□□ -1.51
CD44-236ENST00000533222 CEP170BQ9Y4F5 1589 aaPredicted RBP5.62□□□□□ -1.51
CD44-236ENST00000533222 A0A1W2PP64 1363 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ILVBLA1L0T0 632 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ARGFXA6NJG6 315 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PER2O15055 1255 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CLOCKO15516 846 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 MED14O60244 1454 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TSPAN3O60637 253 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TRIM13O60858 407 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ULK1O75385 1050 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CSDE1O75534 798 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 ADGRL1O94910 1474 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CEP152O94986 1710 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TGDSO95455 350 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PTBP3O95758 552 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 GUCA1CO95843 209 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PLGP00747 810 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 OCM2P0CE71 109 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 OCMP0CE72 109 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 KRT5P13647 590 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CPEP16870 476 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 DRD4P21917 467 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CCNE1P24864 410 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 HLA-FP30511 346 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 RRM2P31350 389 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TALDO1P37837 337 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 SLC9A3P48764 834 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PPM1FP49593 454 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 EIF2B2P49770 351 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms