RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 FBXO30Q8TB52 745 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 NSMCE1Q8WV22 266 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 KCNE4Q8WWG9 221 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 PSPC1Q8WXF1 523 aaKnown RBP4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 MRPS27Q92552 414 aaKnown RBP4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 GTF3C6Q969F1 213 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 ZBTB8AQ96BR9 441 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 MOAP1Q96BY2 351 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 CHFRQ96EP1 664 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 MARS2Q96GW9 593 aaKnown RBP4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 PPP1R13BQ96KQ4 1090 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF512Q96ME7 567 aaPredicted RBP4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 WDFY2Q96P53 400 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 TMEM237Q96Q45 408 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 SYT3Q9BQG1 590 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 TMEM168Q9H0V1 697 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 SMOC2Q9H3U7 446 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 PIH1D3Q9NQM4 214 aaKnown RBP4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 C20orf141Q9NUB4 165 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 SIRT5Q9NXA8 310 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 GDE1Q9NZC3 331 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 COQ3Q9NZJ6 369 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 KIAA1456Q9P272 454 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 EXTL2Q9UBQ6 330 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 SORCS3Q9UPU3 1222 aa4.5□□□□□ -1.69
AC055878.1-201ENST00000531858 A0A087WV48 116 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 A4D1N5 150 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KRT87PA6NCN2 255 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 LRRC72A6NJI9 287 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 OR6C76A6NM76 312 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ADAMDEC1O15204 470 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 PEX10O60683 326 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZC3H11AO75152 810 aaKnown RBP eCLIP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SLC25A12O75746 678 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 STAM2O75886 525 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 IPO13O94829 963 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CAMTA2O94983 1202 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 GCNT3O95395 438 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SUPT20HL2P0C7V6 817 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF37AP17032 561 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 HOXB9P17482 250 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 TRIM21P19474 475 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 AVPR2P30518 371 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 HOXA11P31270 313 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CDAP32320 146 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CCR10P46092 362 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 NT5C2P49902 561 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SLC12A3P55017 1021 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RRADP55042 308 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RPS7P62081 194 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 YPEL5P62699 121 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 HTD2P86397 168 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CYP4A11Q02928 519 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RIN1Q13671 783 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RRP1BQ14684 758 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SHBQ15464 509 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 PKN1Q16512 942 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZSCAN23Q3MJ62 389 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SUPT20HL1Q3ZLR7 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKRD20A4Q4UJ75 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKRD20A8PQ5CZ79 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZRANB3Q5FWF4 1079 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF667Q5HYK9 610 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKRD20A2Q5SQ80 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SH2D4BQ5SQS7 431 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RBM20Q5T481 1227 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKRD20A1Q5TYW2 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKRD20A3Q5VUR7 823 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KIAA0930Q6ICG6 404 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 DPY19L2P1Q6NXN4 242 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KIAA1324Q6UXG2 1013 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 SAMD14Q8IZD0 417 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 PI4KAP1Q8N8J0 262 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 MRPL43Q8N983 215 aaKnown RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 TC2NQ8N9U0 490 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 IQUBQ8NA54 791 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF483Q8TF39 744 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CLEC4CQ8WTT0 213 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF606Q8WXB4 792 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CORO2AQ92828 525 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ARHGEF26Q96DR7 871 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 MMABQ96EY8 250 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CDCA5Q96FF9 252 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 KIRREL1Q96J84 757 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RUNDC3BQ96NL0 473 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CAMK1GQ96NX5 476 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 AGAP2Q99490 1192 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM118BQ9BPY3 351 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 MGME1Q9BQP7 344 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 NUP85Q9BW27 656 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CINPQ9BW66 212 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RNF26Q9BY78 433 aaPredicted RBP4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 TRIM31Q9BZY9 425 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 NT5C3AQ9H0P0 336 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 HRH4Q9H3N8 390 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ST6GALNAC4Q9H4F1 302 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms