RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CCNHP51946 323 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 RPS21P63220 83 aaKnown RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 E2F1Q01094 437 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 CDR2Q01850 454 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 PROX2Q3B8N5 592 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 FKBP15Q5T1M5 1219 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 TMC6Q7Z403 805 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 BNIPLQ7Z465 357 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 C11orf70Q9BRQ4 267 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 TM6SF2Q9BZW4 377 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 FAM207AQ9NSI2 230 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 UCKL1Q9NWZ5 548 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 IPO11Q9UI26 975 aaKnown RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 DNAI1Q9UI46 699 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 CLCA2Q9UQC9 943 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ACTL7AQ9Y615 435 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 HS3ST3A1Q9Y663 406 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 LAMA5O15230 3695 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 NBEAQ8NFP9 2946 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 A0A087WV48 116 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 NEMP1O14524 444 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ITGB7P26010 798 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ACVRL1P37023 503 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 KLK7P49862 253 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ARF5P84085 180 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 SGCGQ13326 291 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 CCDC14Q49A88 953 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 RAB6CQ53S08 254 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZNF542PQ5EBM4 170 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 LRRC69Q6ZNQ3 347 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 PTAR1Q7Z6K3 402 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 FAM174AQ8TBP5 190 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 PCMTD1Q96MG8 357 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 NRSN2Q9GZP1 204 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 RAB6CQ9H0N0 254 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 DNAJC28Q9NX36 388 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZNF212Q9UDV6 495 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 NOCTQ9UK39 431 aaKnown RBP22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 ASXL3Q9C0F0 2248 aa22.8■■□□□ 1.24
TRAPPC4-208ENST00000527680 NEMP2A6NFY4 417 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 A6NNZ2 444 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 ALPPL2P10696 532 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 MMP8P22894 467 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 SOX5P35711 763 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 ABCG1P45844 678 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 POLD3Q15054 466 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 KIAA1161Q6NSJ0 714 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 GCNT7Q6ZNI0 430 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZNF354CQ86Y25 554 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 DCP2Q8IU60 420 aaKnown RBP22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 OR4C6Q8NH72 309 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 ENOX1Q8TC92 643 aaKnown RBP22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 GPT2Q8TD30 523 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 GANQ9H2C0 597 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 FADS3Q9Y5Q0 445 aa22.79■■□□□ 1.24
TRAPPC4-208ENST00000527680 CELSR3Q9NYQ7 3312 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 EIF4E1BA6NMX2 242 aaKnown RBP22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 PIAS2O75928 621 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 GJB6O95452 261 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 CYP1A1P04798 512 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 RHOQP17081 205 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 CHRNB2P17787 502 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 STAT1P42224 750 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 GEMIN4P57678 1058 aaKnown RBP22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 INSM1Q01101 510 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 FMO1Q01740 532 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 KRT31Q15323 416 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 TMEM259Q4ZIN3 620 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 SOWAHCQ53LP3 525 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 ARTNQ5T4W7 220 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 KDM7AQ6ZMT4 941 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 ABI3BPQ7Z7G0 1075 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 OR6K2Q8NGY2 324 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 JOSD2Q8TAC2 188 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 BMFQ96LC9 184 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 OSBPL2Q9H1P3 480 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 NDFIP2Q9NV92 336 aa22.78■■□□□ 1.24
TRAPPC4-208ENST00000527680 POM121BA6NF01 834 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 KRIT1O00522 736 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 RRP8O43159 456 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 PLEKP08567 350 aaPredicted RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 KRT3P12035 628 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 GKP32189 559 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 NSFP46459 744 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 MAPKAPK2P49137 400 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 RTP5Q14D33 572 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 ACAP1Q15027 740 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 SYCP1Q15431 976 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 TRIM72Q6ZMU5 477 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 LEKR1Q6ZMV7 388 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 PARS2Q7L3T8 475 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 STRADAQ7RTN6 431 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 SLC22A18ASQ8N1D0 253 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 ARHGEF2Q92974 986 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 ISG20Q96AZ6 181 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 SELENOOQ9BVL4 669 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 MAGEB5Q9BZ81 275 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 MAGEH1Q9H213 219 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 RETREG1Q9H6L5 497 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 CAAP1Q9H8G2 361 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms