RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 J3KR12 359 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 RNF103O00237 685 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 SLC7A4O43246 635 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 KDELR1P24390 212 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 DNA2P51530 1060 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 SNRPD1P62314 119 aaKnown RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 KRT81Q14533 505 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 SF3A2Q15428 464 aaKnown RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 DUOXA1Q1HG43 343 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 TMCO3Q6UWJ1 677 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 MAP7D3Q8IWC1 876 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 TP53INP2Q8IXH6 220 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 OR2AP1Q8NGE2 309 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 OR2T34Q8NGX1 318 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 C1orf216Q8TAB5 229 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 CEP76Q8TAP6 659 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 ARRDC3Q96B67 414 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 LRIG1Q96JA1 1093 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 HECAQ9UBI9 543 aaPredicted RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 MFHAS1Q9Y4C4 1052 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.17□□□□□ -0.3
CTSB-209ENST00000525315 SPTBN4Q9H254 2564 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 LRRC72A6NJI9 287 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 ZNF487B1APH4 448 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 PJA2O43164 708 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 LEFTY1O75610 366 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 TMCC1O94876 653 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 MAOBP27338 520 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 CCR5P51681 352 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 ADPRHP54922 357 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 IRX4P78413 519 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 IL10RBQ08334 325 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 CNTN1Q12860 1018 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 NCEH1Q6PIU2 408 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 ARHGAP36Q6ZRI8 547 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 RABEPKQ7Z6M1 372 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 VSIG1Q86XK7 387 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 OR14C36Q8NHC7 312 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 PCDH19Q8TAB3 1148 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 ZNF670Q9BS34 389 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 HDAC8Q9BY41 377 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 SALL4Q9UJQ4 1053 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.16□□□□□ -0.3
CTSB-209ENST00000525315 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
CTSB-209ENST00000525315 KNL1Q8NG31 2342 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 MEI4A8MW99 385 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 DFFAO00273 331 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 PLK4O00444 970 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 PLRG1O43660 514 aaKnown RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 SERPINF2P08697 491 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 COMTP21964 271 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 SERPINB6P35237 376 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 GJC1P36383 396 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 LMNB2Q03252 620 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTSB-209ENST00000525315 RFTN1Q14699 578 aaPredicted RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 PIP5KL1Q5T9C9 394 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 AGBL4Q5VU57 503 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 LRRC49Q8IUZ0 686 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 C12orf50Q8NA57 414 aaPredicted RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 ZNF599Q96NL3 588 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 CALN1Q9BXU9 219 aa13.15□□□□□ -0.3
CTSB-209ENST00000525315 CPEB1Q9BZB8 566 aaKnown RBP13.15□□□□□ -0.3
CTSB-209ENST00000525315 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms