RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GANCQ8TET4 914 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 GPR174Q9BXC1 333 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 DYRK4Q9NR20 520 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 SUSD2Q9UGT4 822 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 IPO11Q9UI26 975 aaKnown RBP12.77□□□□□ -0.37
VEGFA-225ENST00000523950 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
VEGFA-225ENST00000523950 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 MEI4A8MW99 385 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 POP4O95707 220 aaKnown RBP12.76□□□□□ -0.37
VEGFA-225ENST00000523950 KRT1P04264 644 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 CTSLP07711 333 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ZFXP17010 805 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ACSL1P33121 698 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 DRD3P35462 400 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 HSPA9P38646 679 aaKnown RBP12.76□□□□□ -0.37
VEGFA-225ENST00000523950 PTGER3P43115 390 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 RHOAP61586 193 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 SLC41A1Q8IVJ1 513 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 BBS5Q8N3I7 341 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ATPAF2Q8N5M1 289 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 CHST14Q8NCH0 376 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 PCDH19Q8TAB3 1148 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 CEP76Q8TAP6 659 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 NSMCE1Q8WV22 266 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 DNASE2BQ8WZ79 361 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 RAPGEF5Q92565 580 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 HSPA12BQ96MM6 686 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 HDAC8Q9BY41 377 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 NEUROG2Q9H2A3 272 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ETNK2Q9NVF9 386 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-225ENST00000523950 PILRBQ9UKJ0 227 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 ACTL7AQ9Y615 435 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 WASF2Q9Y6W5 498 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 OTOGLQ3ZCN5 2332 aa12.76□□□□□ -0.37
VEGFA-225ENST00000523950 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 C10orf142B7Z368 130 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 J3KR12 359 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 KPNA3O00505 521 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 PLRG1O43660 514 aaKnown RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 LEFTY1O75610 366 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 PALMO75781 387 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 GNSP15586 552 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 MX2P20592 715 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 TGM1P22735 817 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ITGB7P26010 798 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 NUDT1P36639 197 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 MAPK8P45983 427 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 CSNK1DP48730 415 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 DNA2P51530 1060 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 RENBPP51606 427 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ADPRHP54922 357 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 LMNB2Q03252 620 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 GALNT2Q10471 571 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 CYTH1Q15438 398 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 MYLK3Q32MK0 819 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 KIAA0895LQ68EN5 471 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 SLC9A4Q6AI14 798 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 TIGD7Q6NT04 549 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 NEK5Q6P3R8 708 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 KATNAL2Q8IYT4 538 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 SYCE1Q8N0S2 351 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 RYBPQ8N488 228 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 DCLK2Q8N568 766 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 PIGKQ92643 395 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 FATE1Q969F0 183 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 CINPQ9BW66 212 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 MAK16Q9BXY0 300 aaKnown RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 CPEB1Q9BZB8 566 aaKnown RBP12.75□□□□□ -0.37
VEGFA-225ENST00000523950 LACRTQ9GZZ8 138 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 PREBQ9HCU5 417 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 KLHL11Q9NVR0 708 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 HAUS2Q9NVX0 235 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 LHX3Q9UBR4 397 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms