RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 BGNP21810 368 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ACLYP53396 1101 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 MBTD1Q05BQ5 628 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 FBXO39Q8N4B4 442 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 SERAC1Q96JX3 654 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 CHST7Q9NS84 486 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 KCNK4Q9NYG8 393 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ATXN10Q9UBB4 475 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 C1orf232A0A0U1RR37 186 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 TPST1O60507 370 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 CNOT3O75175 753 aaKnown RBP16.38■□□□□ 0.21
USP42-207ENST00000521713 CCNB1P14635 433 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ENPEPQ07075 957 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ARMC4Q5T2S8 1044 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ZSWIM2Q8NEG5 633 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 APOL4Q9BPW4 351 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 CLUHO75153 1309 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 SERPINE1P05121 402 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 TFE3P19532 575 aaPredicted RBP16.38■□□□□ 0.21
USP42-207ENST00000521713 NR1H2P55055 460 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ANKS6Q68DC2 871 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 MTSS1LQ765P7 747 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ZCCHC9Q8N567 271 aaKnown RBP16.38■□□□□ 0.21
USP42-207ENST00000521713 TDRD5Q8NAT2 981 aaKnown RBP16.38■□□□□ 0.21
USP42-207ENST00000521713 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
USP42-207ENST00000521713 SHCBP1LQ9BZQ2 653 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 GNG14A0A1W2PPG7 69 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 GPR25O00155 361 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ERCC2P18074 760 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 SULT2A1Q06520 285 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 SLC25A52Q3SY17 297 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 BDH2Q9BUT1 245 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 POLG2Q9UHN1 485 aa16.38■□□□□ 0.21
USP42-207ENST00000521713 CILPO75339 1184 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 CATP04040 527 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 IL12RB1P42701 662 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 POU5F1Q01860 360 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 RGS21Q2M5E4 152 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 OR6Y1Q8NGX8 325 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 C9orf16Q9BUW7 83 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 PRDM12Q9H4Q4 367 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 GOLGA2P5Q9HBQ8 144 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 EVA1BQ9NVM1 165 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 C6orf203Q9P0P8 240 aaPredicted RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 EPHB6O15197 1021 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 ZBTB14O43829 449 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 CALCAP01258 141 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 SKP1P63208 163 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 CDC16Q13042 620 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 PKN2Q16513 984 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 GALNTL6Q49A17 601 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 NLNQ9BYT8 704 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 A0A096LPK6 155 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 QSOX1O00391 747 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 FAM153BP0C7A2 387 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 MLNP12872 115 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 ITGB6P18564 788 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 ME2P23368 584 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 FAM153CQ494X1 144 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 FUT10Q6P4F1 479 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 TSEN2Q8NCE0 465 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 SETD9Q8NE22 299 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 IL1RL2Q9HB29 575 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 CATSPERZQ9NTU4 200 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 PCNAP12004 261 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 TAF10Q12962 218 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 INTS6LQ5JSJ4 861 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 ATAT1Q5SQI0 421 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 TTC7BQ86TV6 843 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
USP42-207ENST00000521713 RSL24D1Q9UHA3 163 aaKnown RBP16.37■□□□□ 0.21
USP42-207ENST00000521713 CLOCKO15516 846 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 CCNT2O60583 730 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 TBCELQ5QJ74 424 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 IRF2BP2Q7Z5L9 587 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 SMG7Q92540 1137 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 FAXDC2Q96IV6 333 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 LRMDAQ9H2I8 198 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 TCF7L2Q9NQB0 619 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 TRIM13O60858 407 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 CD86P42081 329 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 CDK7P50613 346 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 EPS8Q12929 822 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 RBM23Q86U06 439 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 RGL4Q8IZJ4 473 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 IRGQQ8WZA9 623 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 FCRL2Q96LA5 508 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms