RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TRHDEQ9UKU6 1024 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 ATP8A1Q9Y2Q0 1164 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 STON1Q9Y6Q2 735 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 MUC22E2RYF6 1773 aaPredicted RBP18.09■□□□□ 0.49
SDC2-205ENST00000520233 CTAGE15A4D2H0 777 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 GCATO75600 419 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 GSRP00390 522 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 HLA-DQB2P05538 268 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 CTAGE8P0CG41 777 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 NTSR1P30989 418 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 NSUN2Q08J23 767 aaKnown RBP eCLIP18.08■□□□□ 0.48
SDC2-205ENST00000520233 P3H1Q32P28 736 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 HNRNPA1L2Q32P51 320 aaKnown RBP18.08■□□□□ 0.48
SDC2-205ENST00000520233 ANKRD20A2Q5SQ80 823 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 ANKRD20A1Q5TYW2 823 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 ANKRD20A3Q5VUR7 823 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 SDE2Q6IQ49 451 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 GSTA5Q7RTV2 222 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 PID1Q7Z2X4 250 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 CTAGE6Q86UF2 777 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 CTAGE4Q8IX94 777 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 PGBD5Q8N414 524 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 TSEN2Q8NCE0 465 aaKnown RBP18.08■□□□□ 0.48
SDC2-205ENST00000520233 PJA1Q8NG27 643 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 SPATA13Q96N96 652 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 GABRG3Q99928 467 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 MGME1Q9BQP7 344 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 CEP41Q9BYV8 373 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 ZDHHC4Q9NPG8 344 aa18.08■□□□□ 0.48
SDC2-205ENST00000520233 KLHL8Q9P2G9 620 aaPredicted RBP18.08■□□□□ 0.48
SDC2-205ENST00000520233 EDDM13A0A1B0GTR0 161 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 TARSL2A2RTX5 802 aaKnown RBP18.07■□□□□ 0.48
SDC2-205ENST00000520233 CHURC1-FNTBB4DL54 471 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 WASH3PC4AMC7 463 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 STK25O00506 426 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 MUSKO15146 869 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 OPHN1O60890 802 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 KLF8O95600 359 aaPredicted RBP18.07■□□□□ 0.48
SDC2-205ENST00000520233 IFNB1P01574 187 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 HLA-EP13747 358 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 PRKCHP24723 683 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 CSNK1DP48730 415 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 NRLP54845 237 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 SNRPD1P62314 119 aaKnown RBP18.07■□□□□ 0.48
SDC2-205ENST00000520233 CARD16Q5EG05 197 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 ALG1LQ6GMV1 187 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 Q6ZVU0 165 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 OR2AP1Q8NGE2 309 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 RPLP0P6Q8NHW5 317 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 PTPRN2Q92932 1015 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 CLDN23Q96B33 292 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 AGAP3Q96P47 875 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 KRT12Q99456 494 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 CARD6Q9BX69 1037 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 POLR1EQ9GZS1 481 aaKnown RBP18.07■□□□□ 0.48
SDC2-205ENST00000520233 TNKS2Q9H2K2 1166 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
SDC2-205ENST00000520233 ZBTB24O43167 697 aaPredicted RBP18.06■□□□□ 0.48
SDC2-205ENST00000520233 ECEL1O95672 775 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 IGSF6O95976 241 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 GAS8O95995 478 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 EPHX1P07099 455 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 CES1P23141 567 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 ACTN2P35609 894 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 WASP42768 502 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 PTGIRP43119 386 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 RECQLP46063 649 aaPredicted RBP18.06■□□□□ 0.48
SDC2-205ENST00000520233 DHX34Q14147 1143 aaKnown RBP18.06■□□□□ 0.48
SDC2-205ENST00000520233 RALGPS1Q5JS13 557 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 EOGTQ5NDL2 527 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 ITPRIPL1Q6GPH6 555 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 ZNF366Q8N895 744 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 TXNDC5Q8NBS9 432 aaKnown RBP18.06■□□□□ 0.48
SDC2-205ENST00000520233 OR2A12Q8NGT7 310 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 CCDC110Q8TBZ0 833 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 GDAP1L1Q96MZ0 367 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 NUDCD1Q96RS6 583 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 TM6SF2Q9BZW4 377 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 GLOD4Q9HC38 313 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 SIT1Q9Y3P8 196 aa18.06■□□□□ 0.48
SDC2-205ENST00000520233 SHROOM3Q8TF72 1996 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 DLL1O00548 723 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 ADAM23O75077 832 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 ATG13O75143 517 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 CR2P20023 1033 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 CD68P34810 354 aaPredicted RBP18.05■□□□□ 0.48
SDC2-205ENST00000520233 RPS9P46781 194 aaKnown RBP18.05■□□□□ 0.48
SDC2-205ENST00000520233 RGRP47804 291 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 MAXP61244 160 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 DR1Q01658 176 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 ITKQ08881 620 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 FAM182AQ5T1J6 154 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 ATXN7L2Q5T6C5 722 aaPredicted RBP18.05■□□□□ 0.48
SDC2-205ENST00000520233 C9orf64Q5T6V5 341 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 C4orf22Q6V702 233 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 Q6ZS52 159 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 ARHGEF18Q6ZSZ5 1173 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 SYDE1Q6ZW31 735 aaPredicted RBP18.05■□□□□ 0.48
SDC2-205ENST00000520233 MMGT1Q8N4V1 131 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms