RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TBX15Q96SF7 602 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 RNF26Q9BY78 433 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 ACBD3Q9H3P7 528 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 MKKSQ9NPJ1 570 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CNNM1Q9NRU3 951 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 GNL3LQ9NVN8 582 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 XPR1Q9UBH6 696 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SIX4Q9UIU6 781 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 MSRB2Q9Y3D2 182 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CHTOPQ9Y3Y2 248 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 KDM2BQ8NHM5 1336 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ACOD1A6NK06 481 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 SOCS3O14543 225 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 TIMM23O14925 209 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 AHSGP02765 367 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 IGKV4-1P06312 121 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ASNSP08243 561 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 VDRP11473 427 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 XRCC6P12956 609 aaKnown RBP eCLIP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 PDIA4P13667 645 aaKnown RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 OSMP13725 252 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 YY1P25490 414 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 KLRC1P26715 233 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 IL15P40933 162 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ADCYAP1R1P41586 468 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 LIFRP42702 1097 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 MECOMQ03112 1051 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 PAX8Q06710 450 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 AMOTQ4VCS5 1084 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 EIPR1Q53HC9 387 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 XKR3Q5GH77 459 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 FFAR4Q5NUL3 377 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 IRAK1BP1Q5VVH5 260 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 PWWP2BQ6NUJ5 590 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 RBMS3Q6XE24 437 aaKnown RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 KIAA0907Q7Z7F0 614 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ADCK1Q86TW2 530 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 HERC6Q8IVU3 1022 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 C11orf44Q8N8P7 122 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 LRRC57Q8N9N7 239 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 CMASQ8NFW8 434 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 BBS10Q8TAM1 723 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 CEP76Q8TAP6 659 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 TMEM163Q8TC26 289 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 STT3BQ8TCJ2 826 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC35F5Q8WV83 523 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZFAND2BQ8WV99 257 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 SEMA4DQ92854 862 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ESAMQ96AP7 390 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 MTBPQ96DY7 904 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 TMEM19Q96HH6 336 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 C3orf30Q96M34 536 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 MOGAT1Q96PD6 335 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 MXD3Q9BW11 206 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 WNT5BQ9H1J7 359 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 EMC7Q9NPA0 242 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 MYNNQ9NPC7 610 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 INPP5EQ9NRR6 644 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 IL17CQ9P0M4 197 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 FBXO40Q9UH90 709 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 KLK12Q9UKR0 248 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 R3HCC1Q9Y3T6 440 aaKnown RBP-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC4A4Q9Y6R1 1079 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 KIAA1217Q5T5P2 1943 aa-0.64□□□□□ -2.51
RNU6-542P-201ENST00000516405 COL15A1P39059 1388 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 SYNE1Q8NF91 8797 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 LOC101059948A0A1B0GTJ6 334 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 FAM227AF5H4B4 570 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PLD2O14939 933 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 MAGEB4O15481 346 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PHGDHO43175 533 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 GRPP07492 148 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 ELK1P19419 428 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 UGT1A4P22310 534 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 IL4RP24394 825 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 DUSP1P28562 367 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRKAR1BP31321 381 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 LSSP48449 732 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 AGTR2P50052 363 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 RPP30P78346 268 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 RASGRF1Q13972 1273 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 HEPHL1Q6MZM0 1159 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 KCTD8Q6ZWB6 473 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZNF589Q86UQ0 364 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC47A2Q86VL8 602 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PPP1R3BQ86XI6 285 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 CPA6Q8N4T0 437 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 HORMAD2Q8N7B1 307 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 EXD3Q8N9H8 876 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 LMBR1Q8WVP7 490 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 ASB12Q8WXK4 309 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZDHHC12Q96GR4 267 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 REXO5Q96IC2 774 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 GFM1Q96RP9 751 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 LRRC1Q9BTT6 524 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 LMF2Q9BU23 707 aaKnown RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 HES7Q9BYE0 225 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRIM5Q9C035 493 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms