RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 MBLAC2Q68D91 279 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 DLG3Q92796 817 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TTC1Q99614 292 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 MRPL40Q9NQ50 206 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 DPP3Q9NY33 737 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TXNDC16Q9P2K2 825 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.31
HMGB2-205ENST00000511316 KPNA7A9QM74 516 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 TGM5O43548 720 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 CREB3O43889 395 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 C1RP00736 705 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 URODP06132 367 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 CD48P09326 243 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 PGAM1P18669 254 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 SDC4P31431 198 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 ARHGAP8P85298 464 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 ELAVL2Q12926 359 aaKnown RBP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 ANKRD20A4Q4UJ75 823 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 C16orf89Q6UX73 402 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 CDHR3Q6ZTQ4 885 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 ARHGAP22Q7Z5H3 698 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 SIGLEC10Q96LC7 697 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 QKIQ96PU8 341 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 COL25A1Q9BXS0 654 aaPredicted RBP13.08□□□□□ -0.32
HMGB2-205ENST00000511316 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
HMGB2-205ENST00000511316 E5RJQ4 531 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 AP3B1O00203 1094 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 PLIN3O60664 434 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 OPHN1O60890 802 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 OAZ2O95190 189 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 PTPN9P43378 593 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 NDUFV1P49821 464 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 CHN2P52757 468 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 LRRC23Q53EV4 343 aaPredicted RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 RARS2Q5T160 578 aaKnown RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 PTCRAQ6ISU1 281 aaPredicted RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 KIAA1841Q6NSI8 718 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 LIMS2Q7Z4I7 341 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 RXFP2Q8WXD0 754 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 EMILIN2Q9BXX0 1053 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 NXF1Q9UBU9 619 aaKnown RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 RAB26Q9ULW5 256 aa13.07□□□□□ -0.32
HMGB2-205ENST00000511316 TIMM13Q9Y5L4 95 aaPredicted RBP13.07□□□□□ -0.32
HMGB2-205ENST00000511316 SYN3O14994 580 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 DENRO43583 198 aaKnown RBP13.06□□□□□ -0.32
HMGB2-205ENST00000511316 SIN3BO75182 1162 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 ABLIM3O94929 683 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 SPATA31D3P0C874 917 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 RBL1P28749 1068 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 CPA2P48052 419 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 LSAMPQ13449 338 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 RAB33AQ14088 237 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 CNPY1Q3B7I2 92 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 GRTP1Q5TC63 336 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 HEATR6Q6AI08 1181 aaKnown RBP13.06□□□□□ -0.32
HMGB2-205ENST00000511316 LRRC8BQ6P9F7 803 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 SCARA5Q6ZMJ2 495 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 SPATA31D4Q6ZUB0 917 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 FBXW8Q8N3Y1 598 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 EMC1Q8N766 993 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 DRAXINQ8NBI3 349 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-205ENST00000511316 RDH11Q8TC12 318 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 DDI1Q8WTU0 396 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 ISL2Q96A47 359 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-205ENST00000511316 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 C12orf65Q9H3J6 166 aaKnown RBP13.06□□□□□ -0.32
HMGB2-205ENST00000511316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■■□□□ 12.4
HMGB2-205ENST00000511316 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 PADI4Q9UM07 663 aa13.06□□□□□ -0.32
HMGB2-205ENST00000511316 DNAJC16Q9Y2G8 782 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms