RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KIF20BQ96Q89 1820 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZMYM6O95789 1325 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SLIT3O75094 1523 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SMIM35A0A1B0GVV1 85 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 DNM1LO00429 736 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CES2O00748 559 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 STRNO43815 780 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NPSP0C0P6 89 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 IDEP14735 1019 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CYP11B2P19099 503 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 POLR2EP19388 210 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PAX3P23760 479 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ATP5DP30049 168 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 HSPA9P38646 679 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 RGS2P41220 211 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 MMP13P45452 471 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NDUFA8P51970 172 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 POLE2P56282 527 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SOX8P57073 446 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ARPC4P59998 168 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ZBED6P86452 979 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NEXNQ0ZGT2 675 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CYLC2Q14093 348 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PLS1Q14651 629 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SPA17Q15506 151 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NDUFA5Q16718 116 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PGS1Q32NB8 556 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TTMPQ5BVD1 217 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC122Q5T0U0 273 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SPATA1Q5VX52 437 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PARS2Q7L3T8 475 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TRPM8Q7Z2W7 1104 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ERICH1Q86X53 443 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PEX5LQ8IYB4 626 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SYCP3Q8IZU3 236 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CNBD1Q8NA66 436 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 XAGE5Q8WWM1 108 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 DNAJC9Q8WXX5 260 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PIGBQ92521 554 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 INPP5DQ92835 1189 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 HAUS1Q96CS2 278 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 KLHL29Q96CT2 875 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF274Q96GC6 653 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 C5orf34Q96MH7 638 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ASB2Q96Q27 587 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 USP28Q96RU2 1077 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TUBB6Q9BUF5 446 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 DCLRE1BQ9H816 532 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TMBIM4Q9HC24 238 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 PPANQ9NQ55 473 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM114A2Q9NRY5 505 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ECHDC1Q9NTX5 307 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 BABAM1Q9NWV8 329 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 ELOVL5Q9NYP7 299 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 TUBGCP4Q9UGJ1 667 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 SATB2Q9UPW6 733 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 NFE2L3Q9Y4A8 694 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 USH1CQ9Y6N9 552 aa4.78□□□□□ -1.64
PDLIM5-211ENST00000508531 A0A1B0GVL5 298 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 A1L4Q6 167 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 DPPA5A6NC42 116 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC169A6NNP5 214 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PPEF2O14830 753 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ADAMTS3O15072 1205 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 P4HA2O15460 535 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 TTI1O43156 1089 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PARNO95453 639 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 LARGE1O95461 756 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 IL33O95760 270 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 TOP3BO95985 862 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 UBTFL1P0CB47 393 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP1A3P13637 1013 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 GYS1P13807 737 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PFKFB1P16118 471 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SP100P23497 879 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 RFC4P35249 363 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 VHLP40337 213 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 MLH1P40692 756 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PPP1R2P41236 205 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 STAT6P42226 847 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 MSH2P43246 934 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 KCNJ5P48544 419 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 RPL26P61254 145 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NKX6-1P78426 367 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 RNASELQ05823 741 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 CBX3Q13185 183 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC39A14Q15043 492 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ACCSLQ4AC99 568 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 THOC7Q6I9Y2 204 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms