RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 STON1Q9Y6Q2 735 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MUC6Q6W4X9 2439 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 SPAG17Q6Q759 2223 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ABCA7Q8IZY2 2146 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TYW5A2RUC4 315 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ZSCAN5CA6NGD5 496 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ARHGAP42A6NI28 874 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 NPC1O15118 1278 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SIN3BO75182 1162 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TJP3O95049 919 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PRLP01236 227 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HLA-DQB2P05538 268 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RBP3P10745 1247 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ZFXP17010 805 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TCP1P17987 556 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 POLR2EP19388 210 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PTPN3P26045 913 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RBL1P28749 1068 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 NTSR1P30989 418 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HOXA6P31267 233 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DRD3P35462 400 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ETFBP38117 255 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CSNK1DP48730 415 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SULT2A1Q06520 285 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SLC20A2Q08357 652 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 NSUN2Q08J23 767 aaKnown RBP eCLIP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 NIPAL4Q0D2K0 466 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 GRSF1Q12849 480 aaKnown RBP eCLIP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DLG2Q15700 870 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HSF5Q4G112 596 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TEX44Q53QW1 395 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 KCTD11Q693B1 232 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 IL31Q6EBC2 164 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 C22orf39Q6P5X5 142 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DPY19L3Q6ZPD9 716 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PRPF39Q86UA1 669 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RFX6Q8HWS3 928 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC50Q8IVM0 306 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ZNF567Q8N184 647 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SPEM1Q8N4L4 309 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TXNDC5Q8NBS9 432 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CHST14Q8NCH0 376 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 P3H4Q92791 437 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SLCO2A1Q92959 643 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HAUS1Q96CS2 278 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SHDQ96IW2 340 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PBKQ96KB5 322 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TEKT5Q96M29 485 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CIPCQ9C0C6 399 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CEP44Q9C0F1 390 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 MUC3BQ9H195 1237 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RSPH9Q9H1X1 276 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 L2HGDHQ9H9P8 463 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 WDR70Q9NW82 654 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DONSONQ9NYP3 566 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 AMACRQ9UHK6 382 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PPM1HQ9ULR3 514 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SIT1Q9Y3P8 196 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 MRFAP1Q9Y605 127 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SAR1BQ9Y6B6 198 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DCHS1Q96JQ0 3298 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TSPAN11A1L157 253 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TTC24A2A3L6 582 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CTAGE9A4FU28 777 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 C5orf60A6NFR6 353 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HACD1B0YJ81 288 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ESPNB1AK53 854 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DFFAO00273 331 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 MCF2LO15068 1137 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 INSIG1O15503 277 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DAPK3O43293 454 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CEP104O60308 925 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 IGLV3-19P01714 112 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ATP5BP06576 529 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ITGAVP06756 1048 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CCNB1P14635 433 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 GABRG2P18507 467 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 GKP32189 559 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PTGIRP43119 386 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 KCNJ1P48048 391 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SEC13P55735 322 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SATB1Q01826 763 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RFTN1Q14699 578 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 LBRQ14739 615 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 UBXN2BQ14CS0 331 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TMCO4Q5TGY1 634 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 RETSATQ6NUM9 610 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 NCEH1Q6PIU2 408 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 Q6ZVU0 165 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ADAT2Q7Z6V5 191 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PRUNE1Q86TP1 453 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC13Q8IYE1 715 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CBARPQ8N350 705 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 FBXL6Q8N531 539 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 AADATQ8N5Z0 425 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 LRRN4CLQ8ND94 238 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 OR2AP1Q8NGE2 309 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 C1orf54Q8WWF1 131 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms