RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PEX11BO96011 259 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 GSRP00390 522 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 NDUFV2P19404 249 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 CCNCP24863 283 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 MSNP26038 577 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 DYNLT1P63172 113 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF33AQ06730 810 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ADCY2Q08462 1091 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 CYTH1Q15438 398 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 TIGD7Q6NT04 549 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 LEKR1Q6ZMV7 388 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 Q6ZVU0 165 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 WDR5BQ86VZ2 330 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 TMPRSS6Q8IU80 811 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 STK40Q8N2I9 435 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 HDAC11Q96DB2 347 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 BRD8Q9H0E9 1235 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 CARD9Q9H257 536 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 ZSCAN32Q9NX65 697 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 FCF1Q9Y324 198 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 MATN3O15232 486 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 RNASEH1O60930 286 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 MAP3K6O95382 1288 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 PXNP49023 591 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 FNTBP49356 437 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 DNA2P51530 1060 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 RPS14P62263 151 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 PPIDQ08752 370 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 DMWDQ09019 674 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 TCF15Q12870 199 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 LBRQ14739 615 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 PDK1Q15118 436 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 CARD16Q5EG05 197 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF776Q68DI1 518 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 HEATR6Q6AI08 1181 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 NPNTQ6UXI9 565 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 DSG4Q86SJ6 1040 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 ZBTB44Q8NCP5 570 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 OR2AP1Q8NGE2 309 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 OR8D1Q8WZ84 308 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 MAML1Q92585 1016 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 P3H4Q92791 437 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 ERLEC1Q96DZ1 483 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 SIPA1Q96FS4 1042 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 LHX3Q9UBR4 397 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 SEPT3Q9UH03 358 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 SCML1Q9UN30 329 aa12.1□□□□□ -0.47
PDLIM5-208ENST00000504489 APOC4-APOC2K7ER74 178 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 APOC2P02655 101 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CHRNA3P32297 505 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CNR2P34972 360 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CSNK1DP48730 415 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 RENBPP51606 427 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PTPN5P54829 565 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 RHOAP61586 193 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 NSUN2Q08J23 767 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 SLC10A7Q0GE19 358 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 KLF1Q13351 362 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 XRCC4Q13426 336 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 KIAA1324Q6UXG2 1013 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 TEX26Q8N6G2 289 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 CCNYQ8ND76 341 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms