RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CKAP5Q14008 2032 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 ZDBF2Q9HCK1 2354 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 PPP1R12AO14974 1030 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CCNB1P14635 433 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 RBL1P28749 1068 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 MAGEA9P43362 315 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 COPAP53621 1224 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 GEMIN4P57678 1058 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 STARD3Q14849 445 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 POM121L1PQ3SYA9 428 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 INO80DQ53TQ3 878 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CARD16Q5EG05 197 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 HEATR6Q6AI08 1181 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 ANO7Q6IWH7 933 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 DARS2Q6PI48 645 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 DPY19L3Q6ZPD9 716 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 LRRC49Q8IUZ0 686 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 MAML2Q8IZL2 1156 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 RASGEF1CQ8N431 466 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 PCDH20Q8N6Y1 951 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 MAML1Q92585 1016 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 NSMCE3Q96MG7 304 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 QKIQ96PU8 341 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CEP44Q9C0F1 390 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 RBM22Q9NW64 420 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 DNPEPQ9ULA0 475 aa13.48□□□□□ -0.25
PDLIM7-212ENST00000504380 CACNA1AO00555 2505 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CACNA1IQ9P0X4 2223 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 F5H423 210 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 K7ESF4 209 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 PLK4O00444 970 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 MCF2LO15068 1137 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 LAMTOR5O43504 91 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CTSLP07711 333 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 RBP3P10745 1247 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 GABRG2P18507 467 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 NDUFV2P19404 249 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 MMP13P45452 471 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CCR3P51677 355 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 METAP1P53582 386 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CSTF1Q05048 431 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 ITKQ08881 620 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF235Q14590 738 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 E2F5Q15329 346 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC45A4Q5BKX6 768 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TIGD7Q6NT04 549 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 KIAA1324Q6UXG2 1013 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 C1orf210Q8IVY1 113 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 PGBD3Q8N328 593 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 OR2T3Q8NH03 318 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 GRIN3AQ8TCU5 1115 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TPSD1Q9BZJ3 242 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 MKRN2Q9H000 416 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 POLMQ9NP87 494 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 HECAQ9UBI9 543 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 SEPT3Q9UH03 358 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 TTLL3Q9Y4R7 772 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 SAR1BQ9Y6B6 198 aa13.47□□□□□ -0.25
PDLIM7-212ENST00000504380 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 KRIT1O00522 736 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 LIASO43766 372 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 GSRP00390 522 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 HLA-DQB2P05538 268 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 TCP1P17987 556 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 PTPN3P26045 913 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CHRNA3P32297 505 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 RECQLP46063 649 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 PSMD8P48556 350 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CCNHP51946 323 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 DGKEP52429 567 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 RPS14P62263 151 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 DSC2Q02487 901 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 WASHC5Q12768 1159 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 TCF15Q12870 199 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 XRCC4Q13426 336 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 RFTN1Q14699 578 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms