RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TSGA13Q96PP4 275 aa20.4■□□□□ 0.86
CTSD-206ENST00000497544 ACTL7AQ9Y615 435 aa20.4■□□□□ 0.86
CTSD-206ENST00000497544 SAR1BQ9Y6B6 198 aa20.4■□□□□ 0.86
CTSD-206ENST00000497544 TTC34A8MYJ7 566 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 H7C0C1 242 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 K7ERQ8 282 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 KIF2AO00139 706 aaPredicted RBP20.39■□□□□ 0.85
CTSD-206ENST00000497544 CES2O00748 559 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 ATP9BO43861 1147 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 FGGP02679 453 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 EPHX1P07099 455 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 HLA-EP13747 358 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 ATP5OP48047 213 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 OTUD4Q01804 1114 aaKnown RBP20.39■□□□□ 0.85
CTSD-206ENST00000497544 AP1B1Q10567 949 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 KLF1Q13351 362 aaPredicted RBP20.39■□□□□ 0.85
CTSD-206ENST00000497544 XRCC4Q13426 336 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 RFTN1Q14699 578 aaPredicted RBP20.39■□□□□ 0.85
CTSD-206ENST00000497544 ZC3H18Q86VM9 953 aaKnown RBP20.39■□□□□ 0.85
CTSD-206ENST00000497544 CCDC13Q8IYE1 715 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 RASGEF1CQ8N431 466 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 SPEM1Q8N4L4 309 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 MYO19Q96H55 970 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 LGMNQ99538 433 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 IER2Q9BTL4 223 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 TMEM245Q9H330 911 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 MMP17Q9ULZ9 603 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 CEP295Q9C0D2 2601 aa20.39■□□□□ 0.85
CTSD-206ENST00000497544 TCRBV7S2A1N4TA0A589 114 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 SGK1O00141 431 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 SLC30A4O14863 429 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 MCF2LO15068 1137 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 SMAD6O43541 496 aaKnown RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 NEBLO76041 1014 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 CD160O95971 181 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 HOXB2P14652 356 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 EIF3EP60228 445 aaKnown RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 ZNF33AQ06730 810 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 PPIDQ08752 370 aaKnown RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 ENPP2Q13822 863 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 GAS6Q14393 721 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 STARD3Q14849 445 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 NOMO1Q15155 1222 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 ZNF528Q3MIS6 628 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 TMCO4Q5TGY1 634 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 PKN3Q6P5Z2 889 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 BBS5Q8N3I7 341 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 ZNF366Q8N895 744 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 COG1Q8WTW3 980 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 LRRN4Q8WUT4 740 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 TFB1MQ8WVM0 346 aaKnown RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 ZNF599Q96NL3 588 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 OLFM3Q96PB7 478 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 NAP1L3Q99457 506 aaPredicted RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 CEP44Q9C0F1 390 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 PDFQ9HBH1 243 aa20.38■□□□□ 0.85
CTSD-206ENST00000497544 FCF1Q9Y324 198 aaKnown RBP20.38■□□□□ 0.85
CTSD-206ENST00000497544 EDDM13A0A1B0GTR0 161 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 HACD1B0YJ81 288 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 MATN3O15232 486 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 BNIP3LO60238 219 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 SYNCRIPO60506 623 aaKnown RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 ADAM23O75077 832 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 TMCC1O94876 653 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 CHRM1P11229 460 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 PRKCHP24723 683 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 RECQLP46063 649 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 RENBPP51606 427 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 LBRQ14739 615 aaKnown RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 CYTH1Q15438 398 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 MARC1Q5VT66 337 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 SYT13Q7L8C5 426 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 GABRG3Q99928 467 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 FERMT1Q9BQL6 677 aa20.37■□□□□ 0.85
CTSD-206ENST00000497544 CINPQ9BW66 212 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 FRMD8P1Q9BZ68 369 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 TTC7AQ9ULT0 858 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 FARP1Q9Y4F1 1045 aaPredicted RBP20.37■□□□□ 0.85
CTSD-206ENST00000497544 TARSL2A2RTX5 802 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 ZNF185O15231 689 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 ZBTB24O43167 697 aaPredicted RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 RBP3P10745 1247 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 CCNB1P14635 433 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 PMLP29590 882 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 RHOAP61586 193 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 MTAPQ13126 283 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 HNRNPDQ14103 355 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 CRY1Q16526 586 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 HNRNPA1L2Q32P51 320 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 C22orf39Q6P5X5 142 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 DARS2Q6PI48 645 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 B4GALNT4Q76KP1 1039 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 PCDH20Q8N6Y1 951 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 ACTRT1Q8TDG2 376 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 FRS2Q8WU20 508 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 ZNF592Q92610 1267 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 PTPRN2Q92932 1015 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 FATE1Q969F0 183 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 ISG20Q96AZ6 181 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms