RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TRIM69Q86WT6 500 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 ARFGAP1Q8N6T3 406 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 DHX35Q9H5Z1 703 aaKnown RBP33.83■■■■□ 3.01
CBX4-203ENST00000494546 ZDHHC6Q9H6R6 413 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 PREBQ9HCU5 417 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 ARHGAP20Q9P2F6 1191 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 HECAQ9UBI9 543 aaPredicted RBP33.83■■■■□ 3.01
CBX4-203ENST00000494546 LUC7L2Q9Y383 392 aaKnown RBP33.83■■■■□ 3.01
CBX4-203ENST00000494546 BUB1O43683 1085 aa33.82■■■■□ 3
CBX4-203ENST00000494546 SERPING1P05155 500 aa33.82■■■■□ 3
CBX4-203ENST00000494546 NAPEPLDQ6IQ20 393 aa33.82■■■■□ 3
CBX4-203ENST00000494546 ERN2Q76MJ5 926 aaKnown RBP33.82■■■■□ 3
CBX4-203ENST00000494546 FNIP1Q8TF40 1166 aa33.82■■■■□ 3
CBX4-203ENST00000494546 ISG20Q96AZ6 181 aaKnown RBP33.82■■■■□ 3
CBX4-203ENST00000494546 PEBP4Q96S96 227 aa33.82■■■■□ 3
CBX4-203ENST00000494546 MRPL47Q9HD33 250 aaKnown RBP33.82■■■■□ 3
CBX4-203ENST00000494546 RASA4BC9J798 803 aa33.81■■■■□ 3
CBX4-203ENST00000494546 H0Y8X5 98 aa33.81■■■■□ 3
CBX4-203ENST00000494546 FGF10O15520 208 aaPredicted RBP33.81■■■■□ 3
CBX4-203ENST00000494546 RASA4O43374 803 aa33.81■■■■□ 3
CBX4-203ENST00000494546 RNGTTO60942 597 aaKnown RBP33.81■■■■□ 3
CBX4-203ENST00000494546 SHC2P98077 582 aa33.81■■■■□ 3
CBX4-203ENST00000494546 TRIP6Q15654 476 aaKnown RBP33.81■■■■□ 3
CBX4-203ENST00000494546 CA9Q16790 459 aa33.81■■■■□ 3
CBX4-203ENST00000494546 SLC45A4Q5BKX6 768 aa33.81■■■■□ 3
CBX4-203ENST00000494546 ERMARDQ5T6L9 678 aa33.81■■■■□ 3
CBX4-203ENST00000494546 OR6K2Q8NGY2 324 aa33.81■■■■□ 3
CBX4-203ENST00000494546 HMCESQ96FZ2 354 aa33.81■■■■□ 3
CBX4-203ENST00000494546 SNRNP25Q9BV90 132 aaKnown RBP33.81■■■■□ 3
CBX4-203ENST00000494546 HDAC8Q9BY41 377 aa33.81■■■■□ 3
CBX4-203ENST00000494546 XPO4Q9C0E2 1151 aaKnown RBP33.81■■■■□ 3
CBX4-203ENST00000494546 PCDHGB2Q9Y5G2 931 aa33.81■■■■□ 3
CBX4-203ENST00000494546 A0A1W2PR77 199 aa33.8■■■■□ 3
CBX4-203ENST00000494546 WASH4PA8MWX3 477 aa33.8■■■■□ 3
CBX4-203ENST00000494546 PRPSAP2O60256 369 aa33.8■■■■□ 3
CBX4-203ENST00000494546 GYPCP04921 128 aa33.8■■■■□ 3
CBX4-203ENST00000494546 TPM3P06753 285 aa33.8■■■■□ 3
CBX4-203ENST00000494546 MIPP30301 263 aa33.8■■■■□ 3
CBX4-203ENST00000494546 CCT8P50990 548 aa33.8■■■■□ 3
CBX4-203ENST00000494546 YBEYP58557 167 aaPredicted RBP33.8■■■■□ 3
CBX4-203ENST00000494546 ZNF423Q2M1K9 1284 aa33.8■■■■□ 3
CBX4-203ENST00000494546 SETMARQ53H47 684 aaPredicted RBP33.8■■■■□ 3
CBX4-203ENST00000494546 KLC2Q9H0B6 622 aa33.8■■■■□ 3
CBX4-203ENST00000494546 DMTF1Q9Y222 760 aa33.8■■■■□ 3
CBX4-203ENST00000494546 CHD5Q8TDI0 1954 aa33.8■■■■□ 3
CBX4-203ENST00000494546 ZSCAN5CA6NGD5 496 aaPredicted RBP33.79■■■■□ 3
CBX4-203ENST00000494546 EEF2KO00418 725 aaKnown RBP33.79■■■■□ 3
CBX4-203ENST00000494546 GKP32189 559 aa33.79■■■■□ 3
CBX4-203ENST00000494546 HTR7P34969 479 aa33.79■■■■□ 3
CBX4-203ENST00000494546 NUDT1P36639 197 aa33.79■■■■□ 3
CBX4-203ENST00000494546 SNRPD1P62314 119 aaKnown RBP33.79■■■■□ 3
CBX4-203ENST00000494546 IL9RQ01113 521 aa33.79■■■■□ 3
CBX4-203ENST00000494546 SUZ12Q15022 739 aaKnown RBP33.79■■■■□ 3
CBX4-203ENST00000494546 NFKBIBQ15653 356 aa33.79■■■■□ 3
CBX4-203ENST00000494546 PARP15Q460N3 678 aa33.79■■■■□ 3
CBX4-203ENST00000494546 PRAMEF14Q5SWL7 426 aa33.79■■■■□ 3
CBX4-203ENST00000494546 PLPP6Q8IY26 295 aa33.79■■■■□ 3
CBX4-203ENST00000494546 PCOLCE2Q9UKZ9 415 aa33.79■■■■□ 3
CBX4-203ENST00000494546 PCNX2A6NKB5 2137 aa33.79■■■■□ 3
CBX4-203ENST00000494546 A0A1W2PQU0 124 aa33.78■■■■□ 3
CBX4-203ENST00000494546 PCDH8O95206 1070 aa33.78■■■■□ 3
CBX4-203ENST00000494546 GSRP00390 522 aa33.78■■■■□ 3
CBX4-203ENST00000494546 ITGB7P26010 798 aa33.78■■■■□ 3
CBX4-203ENST00000494546 NEK3P51956 506 aa33.78■■■■□ 3
CBX4-203ENST00000494546 UMODL1-AS1Q8N2C9 162 aa33.78■■■■□ 3
CBX4-203ENST00000494546 OR2AP1Q8NGE2 309 aa33.78■■■■□ 3
CBX4-203ENST00000494546 KLK6Q92876 244 aa33.78■■■■□ 3
CBX4-203ENST00000494546 KCTD15Q96SI1 283 aaPredicted RBP33.78■■■■□ 3
CBX4-203ENST00000494546 EIF3CLB5ME19 914 aaKnown RBP33.77■■■■□ 3
CBX4-203ENST00000494546 KRIT1O00522 736 aa33.77■■■■□ 3
CBX4-203ENST00000494546 FLRT2O43155 660 aa33.77■■■■□ 3
CBX4-203ENST00000494546 DAPK3O43293 454 aa33.77■■■■□ 3
CBX4-203ENST00000494546 TMCC1O94876 653 aa33.77■■■■□ 3
CBX4-203ENST00000494546 TOP3BO95985 862 aaKnown RBP33.77■■■■□ 3
CBX4-203ENST00000494546 SPINK2P20155 84 aa33.77■■■■□ 3
CBX4-203ENST00000494546 CASP14P31944 242 aa33.77■■■■□ 3
CBX4-203ENST00000494546 SERINC3Q13530 473 aa33.77■■■■□ 3
CBX4-203ENST00000494546 ATXN7L2Q5T6C5 722 aaPredicted RBP33.77■■■■□ 3
CBX4-203ENST00000494546 NEK5Q6P3R8 708 aa33.77■■■■□ 3
CBX4-203ENST00000494546 FBXL19Q6PCT2 694 aa33.77■■■■□ 3
CBX4-203ENST00000494546 NETO2Q8NC67 525 aa33.77■■■■□ 3
CBX4-203ENST00000494546 RHBDD1Q8TEB9 315 aa33.77■■■■□ 3
CBX4-203ENST00000494546 EIF3CQ99613 913 aaKnown RBP33.77■■■■□ 3
CBX4-203ENST00000494546 TSPY26PQ9H489 355 aa33.77■■■■□ 3
CBX4-203ENST00000494546 GDF3Q9NR23 364 aa33.77■■■■□ 3
CBX4-203ENST00000494546 DONSONQ9NYP3 566 aa33.77■■■■□ 3
CBX4-203ENST00000494546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.77■■■■□ 31e-6■■■■□ 21.4
CBX4-203ENST00000494546 TMEM131Q92545 1883 aa33.77■■■■□ 3
CBX4-203ENST00000494546 TLR4O00206 839 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 SLC31A1O15431 190 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 DFNA5O60443 496 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 CBFA2T3O75081 653 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 LRCH4O75427 683 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 STAT4Q14765 748 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 PPP6R3Q5H9R7 873 aaPredicted RBP33.76■■■□□ 2.99
CBX4-203ENST00000494546 DBX2Q6ZNG2 339 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 HORMAD1Q86X24 394 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 CELF6Q96J87 481 aaKnown RBP33.76■■■□□ 2.99
CBX4-203ENST00000494546 THAP2Q9H0W7 228 aa33.76■■■□□ 2.99
CBX4-203ENST00000494546 CA5BQ9Y2D0 317 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms