RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 FAM167BQ9BTA0 163 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 STN1Q9H668 368 aaKnown RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 TREX1Q9NSU2 369 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 IL1RAPL1Q9NZN1 696 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 SCN5AQ14524 2016 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 HEATR9A2RTY3 570 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 F5H5T6 163 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 TRAFD1O14545 582 aaPredicted RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 PAPSS2O95340 614 aaPredicted RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 SERPINE1P05121 402 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 SERINC3Q13530 473 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 IKBKEQ14164 716 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 TPGS2Q68CL5 300 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 SREK1Q8WXA9 508 aaKnown RBP10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 WWP1Q9H0M0 922 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 CWH43Q9H720 699 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 CCSER2Q9H7U1 834 aa10.95□□□□□ -0.66
PHACTR4-204ENST00000493669 H2AFYO75367 372 aaKnown RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PMPCBO75439 489 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 FGF3P11487 239 aaPredicted RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 COL6A2P12110 1019 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 CCL5P13501 91 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 ARCN1P48444 511 aaKnown RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 CCL23P55773 120 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PCLAFQ15004 111 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC14A2Q15849 920 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 KIAA0408Q6ZU52 694 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 TBC1D1Q86TI0 1168 aaPredicted RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 ZC3HC1Q86WB0 502 aaKnown RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PARP9Q8IXQ6 854 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 RDH11Q8TC12 318 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 GIPC2Q8TF65 315 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 RNF208Q9H0X6 261 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 COPG2Q9UBF2 871 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 HEY2Q9UBP5 337 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 CENPFP49454 3210 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 A0A096LPK6 155 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 ACSL4O60488 711 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 HAUS5O94927 633 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PRKCGP05129 697 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 PBX3P40426 434 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC11A2P49281 568 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 LAMB3Q13751 1172 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 POU6F1Q14863 301 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 KRT72Q14CN4 511 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 TAF1BQ53T94 588 aaPredicted RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 TMCO4Q5TGY1 634 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 NADSYN1Q6IA69 706 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 MYRFLQ96LU7 910 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 NT5MQ9NPB1 228 aa10.94□□□□□ -0.66
PHACTR4-204ENST00000493669 J3KR12 359 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PRAMEF11O60813 436 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 SOD2P04179 222 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MYL2P10916 166 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 OR1E1P30953 314 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 OR1D2P34982 312 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PPP3CCP48454 512 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 SERPINH1P50454 418 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PRKAA2P54646 552 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC10A7Q0GE19 358 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 RABGAP1LQ5R372 815 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 HECTD3Q5T447 861 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 C16orf46Q6P387 395 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PSMG2Q969U7 264 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PABPC5Q96DU9 382 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MAGEH1Q9H213 219 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ABLIM3O94929 683 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 C2P06681 752 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 HMBSP08397 361 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CPA3P15088 417 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ZBTB16Q05516 673 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 THOC5Q13769 683 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 SNCBQ16143 134 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PPM1JQ5JR12 505 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 KIAA1841Q6NSI8 718 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ARID3BQ8IVW6 561 aaPredicted RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF461Q8TAF7 563 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PEX13Q92968 403 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TRMT2BQ96GJ1 504 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF778Q96MU6 729 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TSNARE1Q96NA8 513 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 HERC2P3Q9BVR0 1158 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PPP1R12CQ9BZL4 782 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 POLR1EQ9GZS1 481 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms