RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 INSIG1O15503 277 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 GSRP00390 522 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 JCHAINP01591 159 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 HLA-DQB2P05538 268 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CTSLP07711 333 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 C7P10643 843 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 RBP3P10745 1247 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CCNB1P14635 433 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 PRLRP16471 622 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 NDUFV2P19404 249 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 RBL1P28749 1068 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CASQ1P31415 396 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 GKP32189 559 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 DEKP35659 375 aaKnown RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 MMP13P45452 471 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 ATP5OP48047 213 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 PXNP49023 591 aaPredicted RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CCR3P51677 355 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 DGKEP52429 567 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 METAP1P53582 386 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 NRLP54845 237 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 RHOAP61586 193 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 ZNF33AQ06730 810 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 WASHC5Q12768 1159 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 XRCC4Q13426 336 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 HNRNPDQ14103 355 aaKnown RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 IHHQ14623 411 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 RFTN1Q14699 578 aaPredicted RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 STARD3Q14849 445 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 BZW1Q7L1Q6 419 aaKnown RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CNTD1Q8N815 330 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 OR2T3Q8NH03 318 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 PSKH2Q96QS6 385 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 IL12RB2Q99665 862 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SARDHQ9UL12 918 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 DNPEPQ9ULA0 475 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 SLC8A2Q9UPR5 921 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
RHBDF1-211ENST00000493647 BCLAF3A2AJT9 711 aaKnown RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CES2O00748 559 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MCF2LO15068 1137 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 LIASO43766 372 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 APBB3O95704 486 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CR2P20023 1033 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 PTPN3P26045 913 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CHRNA3P32297 505 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CCNHP51946 323 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MAXP61244 160 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 RPS14P62263 151 aaKnown RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 ELAVL3Q14576 367 aaKnown RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 ZNF235Q14590 738 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MYLK3Q32MK0 819 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MARC1Q5VT66 337 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CACUL1Q86Y37 369 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CREG2Q8IUH2 290 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CDKL3Q8IVW4 592 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 PRELID2Q8N945 189 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MDGA1Q8NFP4 955 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 HMGB4Q8WW32 186 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 OR8D1Q8WZ84 308 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MRGPRX1Q96LB2 322 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 GDAP1L1Q96MZ0 367 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 MGME1Q9BQP7 344 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 USP29Q9HBJ7 922 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 POLMQ9NP87 494 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 NT5MQ9NPB1 228 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CD93Q9NPY3 652 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 RBM22Q9NW64 420 aaKnown RBP eCLIP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 HECAQ9UBI9 543 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 EVLQ9UI08 416 aaPredicted RBP12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 PPM1HQ9ULR3 514 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
RHBDF1-211ENST00000493647 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 CACNA1IQ9P0X4 2223 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 PGRMC1O00264 195 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 IGSF6O95976 241 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms