RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 IL12RB1P42701 662 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 NUMBP49757 651 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 SLC10A7Q0GE19 358 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 FZD5Q13467 585 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 SNX1Q13596 522 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 GRM3Q14832 879 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 CARD16Q5EG05 197 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 ITPRIPL1Q6GPH6 555 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 LEKR1Q6ZMV7 388 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 GSTA5Q7RTV2 222 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 CCDC105Q8IYK2 499 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 ALLCQ8N6M5 410 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 CEP112Q8N8E3 955 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 RPLP0P6Q8NHW5 317 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 RTP4Q96DX8 246 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 TEKT5Q96M29 485 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 GDAP1L1Q96MZ0 367 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 FAM118BQ9BPY3 351 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 MGME1Q9BQP7 344 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 TMEM121Q9BTD3 319 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 POLR1EQ9GZS1 481 aaKnown RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 CHRDQ9H2X0 955 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 RBM12Q9NTZ6 932 aaKnown RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 CACNA2D2Q9NY47 1150 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 SMARCAL1Q9NZC9 954 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 HCN2Q9UL51 889 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 MMP17Q9ULZ9 603 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
LSM2-214ENST00000493387 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 MTF2Q9Y483 593 aaPredicted RBP11.74□□□□□ -0.53
LSM2-214ENST00000493387 ALOX15BO15296 676 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 RNASEH1O60930 286 aaKnown RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 GCATO75600 419 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 GAS8O95995 478 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 EPHX1P07099 455 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 PRKCHP24723 683 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 DGKEP52429 567 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 AP1S1P61966 158 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 ITKQ08881 620 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 CAMK2GQ13555 558 aaPredicted RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 ELAVL3Q14576 367 aaKnown RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 P3H1Q32P28 736 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 ALG1LQ6GMV1 187 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 SYT13Q7L8C5 426 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 PID1Q7Z2X4 250 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 SPEM1Q8N4L4 309 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 FAM71DQ8N9W8 422 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 TXNDC5Q8NBS9 432 aaKnown RBP11.73□□□□□ -0.53
LSM2-214ENST00000493387 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 OR2AP1Q8NGE2 309 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 OR8D1Q8WZ84 308 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 LRIG1Q96JA1 1093 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 NUDCD1Q96RS6 583 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 ACOX2Q99424 681 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 LHX3Q9UBR4 397 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 PCYOX1Q9UHG3 505 aa11.73□□□□□ -0.53
LSM2-214ENST00000493387 NYNRINQ9P2P1 1898 aaKnown RBP11.72□□□□□ -0.53
LSM2-214ENST00000493387 PRUNE2Q8WUY3 3088 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.72□□□□□ -0.53
LSM2-214ENST00000493387 CTAGE15A4D2H0 777 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 GOLGA6CA6NDK9 693 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 GOLGA6BA6NDN3 693 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 WASH3PC4AMC7 463 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ADAM23O75077 832 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ZNF821O75541 412 aaPredicted RBP11.72□□□□□ -0.53
LSM2-214ENST00000493387 ECEL1O95672 775 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 IFNB1P01574 187 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 PRNPP04156 253 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 GOLGA6DP0CG33 693 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 HLA-EP13747 358 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 HOXB2P14652 356 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 AOC1P19801 751 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 SFSWAPQ12872 951 aaKnown RBP11.72□□□□□ -0.53
LSM2-214ENST00000493387 ZBTB17Q13105 803 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 SLC14A2Q15849 920 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 MYLK3Q32MK0 819 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ANKRD20A2Q5SQ80 823 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 C9orf64Q5T6V5 341 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ANKRD20A1Q5TYW2 823 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ANKRD20A3Q5VUR7 823 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 Q6ZVU0 165 aa11.72□□□□□ -0.53
LSM2-214ENST00000493387 B4GALNT4Q76KP1 1039 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms