RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 POP4O95707 220 aaKnown RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ADRB3P13945 408 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 GPD1P21695 349 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 GLDCP23378 1020 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ACP1P24666 158 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ACADVLP49748 655 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 CCNHP51946 323 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ARF5P84085 180 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 UBXN1Q04323 297 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 SGCGQ13326 291 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 STX1AQ16623 288 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 CLEC16AQ2KHT3 1053 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 SLFN11Q7Z7L1 901 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 C3orf20Q8ND61 904 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 SLC30A5Q8TAD4 765 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 FAM172AQ8WUF8 416 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ASB12Q8WXK4 309 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 LENG8Q96PV6 779 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 TMPRSS4Q9NRS4 437 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 GPSM3Q9Y4H4 160 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 WASF2Q9Y6W5 498 aa12.69□□□□□ -0.38
COL6A1-205ENST00000492851 COL5A1P20908 1838 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-205ENST00000492851 A6NNZ2 444 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 KDELR3O43731 214 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 LRIG2O94898 1065 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 MBD3O95983 291 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 GSRP00390 522 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 RFC1P35251 1148 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 RABIFP47224 123 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 KLK7P49862 253 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 YBEYP58557 167 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 HNRNPKP61978 463 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 CYP4F3Q08477 520 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 DNAJC3Q13217 504 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 C15orf59Q2T9L4 293 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 TMEM259Q4ZIN3 620 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 INO80DQ53TQ3 878 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF805Q5CZA5 627 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 ARTNQ5T4W7 220 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 MANEALQ5VSG8 457 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 ABI3BPQ7Z7G0 1075 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 NLRP14Q86W24 1093 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 RYBPQ8N488 228 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-205ENST00000492851 OR2AP1Q8NGE2 309 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 NXPE2Q96DL1 559 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 ERGIC2Q96RQ1 377 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 DUSP23Q9BVJ7 150 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 NRSN2Q9GZP1 204 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 CATSPERBQ9H7T0 1116 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 USP29Q9HBJ7 922 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 NCKIPSDQ9NZQ3 722 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 FADS3Q9Y5Q0 445 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 NUMA1Q14980 2115 aa12.68□□□□□ -0.38
COL6A1-205ENST00000492851 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 H3BM21 787 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 NEMP1O14524 444 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 FPGTO14772 594 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 PAK4O96013 591 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 PRLRP16471 622 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 FERP16591 822 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 DGKAP23743 735 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 HTR7P34969 479 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 ACVRL1P37023 503 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 DUSP3P51452 185 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 SUOXP51687 545 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF143P52747 638 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 HDAC4P56524 1084 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 DAB2P98082 770 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 PTP4A2Q12974 167 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 MYLK3Q32MK0 819 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 Q6ZSR6 202 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 OR4C6Q8NH72 309 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 JOSD2Q8TAC2 188 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 RFFLQ8WZ73 363 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 KLK6Q92876 244 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 VCPIP1Q96JH7 1222 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 EPAS1Q99814 870 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 CALN1Q9BXU9 219 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms