RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 BUB1O43683 1085 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 CD59P13987 128 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 CSRP1P21291 193 aaKnown RBP25.13■■□□□ 1.61
UPF3A-209ENST00000492270 IL1R2P27930 398 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 MAT2AP31153 395 aaKnown RBP25.13■■□□□ 1.61
UPF3A-209ENST00000492270 GKP32189 559 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 TRIM14Q14142 442 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 KIF19Q2TAC6 998 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 PPP6R3Q5H9R7 873 aaPredicted RBP25.13■■□□□ 1.61
UPF3A-209ENST00000492270 PIP4P1Q86T03 277 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 UMODL1-AS1Q8N2C9 162 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 DNAJC7Q99615 494 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 HEPHQ9BQS7 1158 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 ZDHHC6Q9H6R6 413 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 GAREM1Q9H706 876 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 FNDC3AQ9Y2H6 1198 aaKnown RBP25.13■■□□□ 1.61
UPF3A-209ENST00000492270 SNX11Q9Y5W9 270 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 TRPM6Q9BX84 2022 aa25.13■■□□□ 1.61
UPF3A-209ENST00000492270 LATO43561 262 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 CYP1A2P05177 515 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 HTR7P34969 479 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 GEMIN4P57678 1058 aaKnown RBP25.12■■□□□ 1.61
UPF3A-209ENST00000492270 YBEYP58557 167 aaPredicted RBP25.12■■□□□ 1.61
UPF3A-209ENST00000492270 SERINC3Q13530 473 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 TEAD4Q15561 434 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 SMTNL2Q2TAL5 461 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 HLA-BQ31612 363 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 RFX8Q6ZV50 586 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 ISG20Q96AZ6 181 aaKnown RBP25.12■■□□□ 1.61
UPF3A-209ENST00000492270 CELF6Q96J87 481 aaKnown RBP25.12■■□□□ 1.61
UPF3A-209ENST00000492270 ANAPC7Q9UJX3 599 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 ANKRD6Q9Y2G4 727 aa25.12■■□□□ 1.61
UPF3A-209ENST00000492270 SHROOM3Q8TF72 1996 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 TMCC1O94876 653 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 WNT1P04628 370 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 PCK1P35558 622 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 RACK1P63244 317 aaKnown RBP25.11■■□□□ 1.61
UPF3A-209ENST00000492270 PARP15Q460N3 678 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 ATXN7L2Q5T6C5 722 aaPredicted RBP25.11■■□□□ 1.61
UPF3A-209ENST00000492270 ADAT2Q7Z6V5 191 aaKnown RBP25.11■■□□□ 1.61
UPF3A-209ENST00000492270 RYBPQ8N488 228 aaPredicted RBP25.11■■□□□ 1.61
UPF3A-209ENST00000492270 OR8K1Q8NGG5 319 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 VOPP1Q96AW1 172 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 PACSIN1Q9BY11 444 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 KDM4CQ9H3R0 1056 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 LRRC19Q9H756 370 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 DYRK4Q9NR20 520 aa25.11■■□□□ 1.61
UPF3A-209ENST00000492270 ZSCAN5CA6NGD5 496 aaPredicted RBP25.1■■□□□ 1.61
UPF3A-209ENST00000492270 EIF3CLB5ME19 914 aaKnown RBP25.1■■□□□ 1.61
UPF3A-209ENST00000492270 KCNK3O14649 394 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 CER1O95813 267 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 ERCC2P18074 760 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 TXNRD3NBQ6F5E7 133 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 ERN2Q76MJ5 926 aaKnown RBP25.1■■□□□ 1.61
UPF3A-209ENST00000492270 TRIM69Q86WT6 500 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 OR2AP1Q8NGE2 309 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 SERAC1Q96JX3 654 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 EIF3CQ99613 913 aaKnown RBP25.1■■□□□ 1.61
UPF3A-209ENST00000492270 SLC39A8Q9C0K1 460 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 ZWILCHQ9H900 591 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 AASDHPPTQ9NRN7 309 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 ABHD10Q9NUJ1 306 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 CWC15Q9P013 229 aaKnown RBP25.1■■□□□ 1.61
UPF3A-209ENST00000492270 CABIN1Q9Y6J0 2220 aa25.1■■□□□ 1.61
UPF3A-209ENST00000492270 UPK3BL1B0FP48 263 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 UPK3BL2E5RIL1 263 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 DAPK3O43293 454 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 RNGTTO60942 597 aaKnown RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 GSRP00390 522 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 CEACAM1P13688 526 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 ADKP55263 362 aaKnown RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 PIGHQ14442 188 aaPredicted RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 ACAP1Q15027 740 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 ASTE1Q2TB18 679 aaPredicted RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 IL27RAQ6UWB1 636 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 PARS2Q7L3T8 475 aaKnown RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 PSTKQ8IV42 348 aaKnown RBP25.09■■□□□ 1.61
UPF3A-209ENST00000492270 NPWQ8N729 165 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 NIPA2Q8N8Q9 360 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 HSPH1Q92598 858 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 PPP1R16AQ96I34 528 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 CAMK1GQ96NX5 476 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 HDAC8Q9BY41 377 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 PREBQ9HCU5 417 aa25.09■■□□□ 1.61
UPF3A-209ENST00000492270 A0A1W2PR77 199 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 J3KR12 359 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 KRIT1O00522 736 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 SH3BP5O60239 455 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 MFAP3LO75121 409 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 ITGB7P26010 798 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 CTSKP43235 329 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 NDST2P52849 883 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 SNRPD1P62314 119 aaKnown RBP25.08■■□□□ 1.61
UPF3A-209ENST00000492270 SLC14A1Q13336 389 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 SLC18A3Q16572 532 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 CPNE8Q86YQ8 564 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 PLPP6Q8IY26 295 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 KLK6Q92876 244 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 CHP1Q99653 195 aa25.08■■□□□ 1.61
UPF3A-209ENST00000492270 NCAPGQ9BPX3 1015 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms