RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PI15O43692 258 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ATP9BO43861 1147 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 MAFKO60675 156 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ZNF189O75820 626 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 MT-CO1P00395 513 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 SRCP12931 536 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 HOXB2P14652 356 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 PECAM1P16284 738 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 IL12RB1P42701 662 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 PAFAH1B1P43034 410 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 STK19P49842 368 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 SERPINH1P50454 418 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 RENBPP51606 427 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 EIF3EP60228 445 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 ARF5P84085 180 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 OTUD4Q01804 1114 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 ZNF33AQ06730 810 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ADCY2Q08462 1091 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 XRCC4Q13426 336 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 MARC1Q5VT66 337 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 PAPD7Q5XG87 772 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 CWF19L1Q69YN2 538 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 DARS2Q6PI48 645 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 ARHGAP36Q6ZRI8 547 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 Q6ZS52 159 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ADAT2Q7Z6V5 191 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 ZC3H18Q86VM9 953 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 RYBPQ8N488 228 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 SPEM1Q8N4L4 309 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 FBXL6Q8N531 539 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 SH2D3CQ8N5H7 860 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 IL17RCQ8NAC3 791 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ACTL9Q8TC94 416 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ZNF592Q92610 1267 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 HDAC11Q96DB2 347 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 MRGPRX3Q96LB0 322 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 ACOX2Q99424 681 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 CINPQ9BW66 212 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 C1QTNF1Q9BXJ1 281 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 CEP44Q9C0F1 390 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 CHRDQ9H2X0 955 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 TMEM245Q9H330 911 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 ZDHHC4Q9NPG8 344 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 HOMER3Q9NSC5 361 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 SPATA6Q9NWH7 488 aaPredicted RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 MMP17Q9ULZ9 603 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 VCANP13611 3396 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 F5P12259 2224 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 EDDM13A0A1B0GTR0 161 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 K7ERQ8 282 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 SGK1O00141 431 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 SIAH2O43255 324 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 BNIP3LO60238 219 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 RNASEH1O60930 286 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 ALDH1A2O94788 518 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 STK10O94804 968 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 PRKCHP24723 683 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 CXCL12P48061 93 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 CCR3P51677 355 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 DGKEP52429 567 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 RHOAP61586 193 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 SNRPD1P62314 119 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 PPIDQ08752 370 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 ITKQ08881 620 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 KLF1Q13351 362 aaPredicted RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 HNRNPDQ14103 355 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 ZNF235Q14590 738 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 HNRNPA1L2Q32P51 320 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 TMEM31Q5JXX7 168 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 SYT13Q7L8C5 426 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 CDKL3Q8IVW4 592 aaPredicted RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 PCDH20Q8N6Y1 951 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 ACTRT1Q8TDG2 376 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 COG1Q8WTW3 980 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 FATE1Q969F0 183 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 ISG20Q96AZ6 181 aaKnown RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 MS4A14Q96JA4 679 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 OLFM3Q96PB7 478 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 LGMNQ99538 433 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 GABRG3Q99928 467 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 PDFQ9HBH1 243 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 RBM22Q9NW64 420 aaKnown RBP eCLIP10.47□□□□□ -0.73
SKA1-204ENST00000488454 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 RNF14Q9UBS8 474 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 SEPT3Q9UH03 358 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
SKA1-204ENST00000488454 TTC7AQ9ULT0 858 aaPredicted RBP10.47□□□□□ -0.73
SKA1-204ENST00000488454 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 TCRBV7S2A1N4TA0A589 114 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 FAM86C2PA6NEL3 165 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 ANTXRLA6NF34 631 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 PRR33A8MZF0 331 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 J3QL48 77 aa10.46□□□□□ -0.73
SKA1-204ENST00000488454 PGRMC1O00264 195 aaKnown RBP10.46□□□□□ -0.73
SKA1-204ENST00000488454 ZNF185O15231 689 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms