RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 PPM1EQ8WY54 764 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 WACQ9BTA9 647 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 MROH8Q9H579 483 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 MRPL44Q9H9J2 332 aaKnown RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 RRN3Q9NYV6 651 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 PLK2Q9NYY3 685 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 IFT80Q9P2H3 777 aaPredicted RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 HDAC6Q9UBN7 1215 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 CACNA1IQ9P0X4 2223 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 DDTLA6NHG4 134 aaPredicted RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A8PA6NJQ4 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A7PA6NKC0 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A22PA8MWA6 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A12PA8MX19 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A23PA8MXZ1 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 SPRY3O43610 288 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 ADAP00813 363 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 IFIT1P09914 478 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A13PP0C7W8 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FAM90A24PP0C7X0 464 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 PSMC2P35998 433 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 PTPN9P43378 593 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 MAPK9P45984 424 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 VAMP2P63027 116 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 FHL1Q13642 323 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 ODF3L2Q3SX64 289 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 DNTTIP2Q5QJE6 756 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 NAPEPLDQ6IQ20 393 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 IL20RBQ6UXL0 311 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 CTU1Q7Z7A3 348 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 CPOQ8IVL8 374 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 CADM3Q8N126 398 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 PELI3Q8N2H9 469 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 ZMIZ2Q8NF64 920 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 RAB40AQ8WXH6 277 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 GFM1Q96RP9 751 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 POLDIP3Q9BY77 421 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 PLAC1Q9HBJ0 212 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 NLKQ9UBE8 527 aa4.72□□□□□ -1.65
PTEN-204ENST00000487939 CNOT7Q9UIV1 285 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 SRPRBQ9Y5M8 271 aaKnown RBP4.72□□□□□ -1.65
PTEN-204ENST00000487939 CCDC196A0A1B0GTZ2 297 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 VWA5AO00534 786 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 PGM1P36871 562 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 PPP3CCP48454 512 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 CCR5P51681 352 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 ARSFP54793 590 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 MAPK7Q13164 816 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 TRPC3Q13507 836 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 ME3Q16798 604 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 RETSATQ6NUM9 610 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 PDXDC1Q6P996 788 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 ADGRG6Q86SQ4 1221 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 SAMD14Q8IZD0 417 aaPredicted RBP4.71□□□□□ -1.66
PTEN-204ENST00000487939 C9orf106Q8NAJ2 232 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 LSM14AQ8ND56 463 aaKnown RBP4.71□□□□□ -1.66
PTEN-204ENST00000487939 TNIP2Q8NFZ5 429 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 OR4N2Q8NGD1 307 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 TBC1D22AQ8WUA7 517 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 ASB5Q8WWX0 329 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 ATOH1Q92858 354 aaPredicted RBP4.71□□□□□ -1.66
PTEN-204ENST00000487939 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 MAELQ96JY0 434 aaKnown RBP4.71□□□□□ -1.66
PTEN-204ENST00000487939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.71□□□□□ -1.66
PTEN-204ENST00000487939 LMAN2LQ9H0V9 348 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 EPHX3Q9H6B9 360 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 TMEM160Q9NX00 188 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 FZD10Q9ULW2 581 aa4.71□□□□□ -1.66
PTEN-204ENST00000487939 LRRFIP2Q9Y608 721 aaKnown RBP4.71□□□□□ -1.66
PTEN-204ENST00000487939 GOLGA6L10A0A0M3HER8 536 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.7□□□□□ -1.66
PTEN-204ENST00000487939 RRN3P2A6NIE6 340 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 OR6C75A6NL08 312 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 PER2O15055 1255 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 NCAM2O15394 837 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 KCNAB3O43448 404 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 CLDN7O95471 211 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
PTEN-204ENST00000487939 MLH1P40692 756 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 BLKP51451 505 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 EDRF1Q3B7T1 1238 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 FSCBQ5H9T9 825 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
PTEN-204ENST00000487939 PRSS45Q7RTY3 260 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 PATL1Q86TB9 770 aaKnown RBP4.7□□□□□ -1.66
PTEN-204ENST00000487939 CHD1LQ86WJ1 897 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 ZDHHC17Q8IUH5 632 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 RBFAQ8N0V3 343 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 CPXM2Q8N436 756 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 LYZL4Q96KX0 146 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 GPR63Q9BZJ6 419 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 DCLK3Q9C098 648 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 IL36RNQ9UBH0 155 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 MYO6Q9UM54 1294 aa4.7□□□□□ -1.66
PTEN-204ENST00000487939 ARHGAP10A1A4S6 786 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms