RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CDCA3Q99618 268 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 PHF7Q9BWX1 381 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 FAM49AQ9H0Q0 323 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 WDCPQ9H6R7 721 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 AZI2Q9H6S1 392 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 SLC9A2Q9UBY0 812 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MUTYHQ9UIF7 546 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 PCDHA6Q9UN73 950 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 SH2B3Q9UQQ2 575 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 POLHQ9Y253 713 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 TRPV2Q9Y5S1 764 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MRFAP1Q9Y605 127 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 KMT2EQ8IZD2 1858 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TCRBV5S1A1TA0A578 114 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TMEM221A6NGB7 291 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 CCDC69A6NI79 296 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 M0R296 226 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 SH2B2O14492 632 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 FCHO1O14526 889 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 PRC1O43663 620 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 HBP1O60381 514 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TLR5O60602 858 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 PLEKHA8P1O95397 391 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 GLP2RO95838 553 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ATF7P17544 494 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 KLRC1P26715 233 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 NRIP1P48552 1158 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ACTR2P61160 394 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 SIGLEC14Q08ET2 396 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 UBE2SQ16763 222 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ZIK1Q3SY52 487 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 LONRF3Q496Y0 759 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 CEP55Q53EZ4 464 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ZNF484Q5JVG2 852 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 MTHFD1LQ6UB35 978 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TMEM184AQ6ZMB5 413 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TRIM72Q6ZMU5 477 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TMTC3Q6ZXV5 915 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 USP45Q70EL2 814 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 SLC24A5Q71RS6 500 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 IRF2BP2Q7Z5L9 587 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ADGRD2Q7Z7M1 963 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 KRT73Q86Y46 540 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ZNF280BQ86YH2 543 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 KIAA0319LQ8IZA0 1049 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 NRACQ8N912 160 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ATP8B4Q8TF62 1192 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TRAPPC12Q8WVT3 735 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 SUSD6Q92537 303 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ZBTB10Q96DT7 871 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 SDF4Q9BRK5 362 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 PTDSS2Q9BVG9 487 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 GLT8D2Q9H1C3 349 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TMX1Q9H3N1 280 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 TLE6Q9H808 572 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 ERVK-5Q9HDB9 667 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 RIC8AQ9NPQ8 531 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 RGS18Q9NS28 235 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 C1orf112Q9NSG2 853 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 KLHL13Q9P2N7 655 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 NDRG4Q9ULP0 352 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 LZTS1Q9Y250 596 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 LRP12Q9Y561 859 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 PCDHB7Q9Y5E2 793 aa4.44□□□□□ -1.7
SNRNP40-205ENST00000486941 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 COL1A2P08123 1366 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 hCG_1642624A0A1W2PR95 340 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 DENND3A2RUS2 1198 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 E5RJQ4 531 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 MGEA5O60502 916 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 RPS6KA5O75582 802 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 FGF18O76093 207 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 TJP3O95049 919 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 UNC5CO95185 931 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 VNN1O95497 513 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 FTLP02792 175 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 POU2F2P09086 479 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 SRGAP2BP0DMP2 458 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 ARP10275 920 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 CYP2A6P11509 494 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 HOXB8P17481 243 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 FPR3P25089 353 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 PPIFP30405 207 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 GATMP50440 423 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 CRYBB1P53674 252 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 ITGB3BPQ13352 177 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 KCNC3Q14003 757 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 DUSP6Q16828 381 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 TMEM266Q2M3C6 531 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 ZNF260Q3ZCT1 412 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 KLHL22Q53GT1 634 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 SPOUT1Q5T280 376 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 FAM102BQ5T8I3 360 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 TEDDM1Q5T9Z0 273 aa4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 RGS7BPQ6MZT1 257 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-205ENST00000486941 KIRREL2Q6UWL6 708 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms