RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF33AQ06730 810 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ADCY2Q08462 1091 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ITKQ08881 620 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 XRCC4Q13426 336 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 CAMK2GQ13555 558 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 NOMO1Q15155 1222 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 LONRF2Q1L5Z9 754 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 CARD16Q5EG05 197 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ZNF776Q68DI1 518 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 KIAA1211LQ6NV74 962 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 KIAA1324Q6UXG2 1013 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 ADAT2Q7Z6V5 191 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 CACUL1Q86Y37 369 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 SLC13A5Q86YT5 568 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 PAF1Q8N7H5 531 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 OR2AP1Q8NGE2 309 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ACTL9Q8TC94 416 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 FRS2Q8WU20 508 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 PRCCQ92733 491 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 PTPRN2Q92932 1015 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 C16orf45Q96MC5 204 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 OLFM3Q96PB7 478 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 TSGA13Q96PP4 275 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 WDR24Q96S15 920 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 OSBPL9Q96SU4 736 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 LGMNQ99538 433 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 MTG2Q9H4K7 406 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ZDHHC6Q9H6R6 413 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 PRSS16Q9NQE7 514 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 PRMT8Q9NR22 394 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 POLR3BQ9NW08 1133 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 FBXO4Q9UKT5 387 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 TTLL3Q9Y4R7 772 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ZDBF2Q9HCK1 2354 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 CUL9Q8IWT3 2517 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 VCANP13611 3396 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 C1QTNF3-AMACRE9PGA6 284 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 KRIT1O00522 736 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 CD160O95971 181 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 IL1BP01584 269 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 PRNPP04156 253 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 CCNB1P14635 433 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 VAV1P15498 845 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 PSMD8P48556 350 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 CCNHP51946 323 aaPredicted RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 ETF1P62495 437 aaKnown RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 SLC10A7Q0GE19 358 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 HNRNPDQ14103 355 aaKnown RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 ANGPT1Q15389 498 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 CYTH1Q15438 398 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 C9orf64Q5T6V5 341 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 FAM46CQ5VWP2 391 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 DARS2Q6PI48 645 aaKnown RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 STK40Q8N2I9 435 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 GANCQ8TET4 914 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 LRRN4Q8WUT4 740 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 FATE1Q969F0 183 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 SIPA1Q96FS4 1042 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 PPP1R16AQ96I34 528 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 QKIQ96PU8 341 aaKnown RBP eCLIP11.57□□□□□ -0.56
NUP50-216ENST00000486184 PRRX2Q99811 253 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 HEPHQ9BQS7 1158 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 HERPUD2Q9BSE4 406 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 NT5MQ9NPB1 228 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 DYRK4Q9NR20 520 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 C2orf42Q9NWW7 574 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 HECAQ9UBI9 543 aaPredicted RBP11.57□□□□□ -0.56
NUP50-216ENST00000486184 IL36AQ9UHA7 158 aa11.57□□□□□ -0.56
NUP50-216ENST00000486184 CEP192Q8TEP8 1941 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 PLXND1Q9Y4D7 1925 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 CACNA1IQ9P0X4 2223 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 GOLGA6L10A0A0M3HER8 536 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 KIF2AO00139 706 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 KCNK1O00180 336 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 PGRMC1O00264 195 aaKnown RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 CES2O00748 559 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 POP4O95707 220 aaKnown RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 ADH1BP00325 375 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 RBP3P10745 1247 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 GABRG2P18507 467 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 NDUFV2P19404 249 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 CHRNA3P32297 505 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 MAPK8P45983 427 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 KLF1Q13351 362 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 BYSLQ13895 437 aaKnown RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 GRM3Q14832 879 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 PRKD1Q15139 912 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 SLC45A4Q5BKX6 768 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 ATXN7L2Q5T6C5 722 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 TSSK4Q6SA08 328 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms