RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FBXL12Q9NXK8 326 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 SARDHQ9UL12 918 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 HEY1Q9Y5J3 304 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ABCA7Q8IZY2 2146 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 PLK4O00444 970 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 KRIT1O00522 736 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 NDUFS2O75306 463 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 GSRP00390 522 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 LMNAP02545 664 aaKnown RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 PRNPP04156 253 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CTSLP07711 333 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CD6P30203 668 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 GKP32189 559 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CDKN2BP42772 138 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 DHPSP49366 369 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 SNRPD1P62314 119 aaKnown RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 GALNT2Q10471 571 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 ZNF235Q14590 738 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CYTH1Q15438 398 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 INO80DQ53TQ3 878 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 TFDP3Q5H9I0 405 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 TMCO4Q5TGY1 634 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 FAM46CQ5VWP2 391 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 PMS2CLQ68D20 193 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 SLC9A4Q6AI14 798 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 NPNTQ6UXI9 565 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 C11orf74Q86VG3 221 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 TMEFF1Q8IYR6 380 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 RCOR2Q8IZ40 523 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 OR2AP1Q8NGE2 309 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 LRRN4Q8WUT4 740 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 ALG3Q92685 438 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 FAM122AQ96E09 287 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 TOE1Q96GM8 510 aaKnown RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 HEPHQ9BQS7 1158 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 GPR174Q9BXC1 333 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 DUSP15Q9H1R2 295 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 HECAQ9UBI9 543 aaPredicted RBP12.04□□□□□ -0.48
HPS4-214ENST00000485842 SERGEFQ9UGK8 458 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 IL36AQ9UHA7 158 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 PPM1HQ9ULR3 514 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 SCML1Q9UN30 329 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 NCKAP1Q9Y2A7 1128 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 PCDHA3Q9Y5H8 950 aa12.04□□□□□ -0.48
HPS4-214ENST00000485842 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 hCG_1818297A0A087WSY0 165 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 PRR23AA6NEV1 266 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 MIF4GDA9UHW6 222 aaKnown RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 PROB1E7EW31 1015 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 MAFKO60675 156 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 CST8O60676 142 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 LEFTY1O75610 366 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 RHOBTB1O94844 696 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 ZFXP17010 805 aaPredicted RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 C5AR1P21730 350 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 OXTRP30559 389 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 GARSP41250 739 aaKnown RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 RWDD2BP57060 319 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 SLC10A7Q0GE19 358 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 SFSWAPQ12872 951 aaKnown RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 SLC10A2Q12908 348 aaPredicted RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 TFDP2Q14188 446 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 NUMA1Q14980 2115 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 SLC36A4Q6YBV0 504 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 USP30Q70CQ3 517 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 LPCAT2Q7L5N7 544 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 HDDC3Q8N4P3 179 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 AADATQ8N5Z0 425 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 SUMF1Q8NBK3 374 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 CCNYQ8ND76 341 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 ARRDC3Q96B67 414 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 HAUS1Q96CS2 278 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 ALS2CR12Q96Q35 445 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 HEMGNQ9BXL5 484 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 DYRK4Q9NR20 520 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 WSB2Q9NYS7 404 aaPredicted RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 DTLQ9NZJ0 730 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 NCDNQ9UBB6 729 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 EVLQ9UI08 416 aaPredicted RBP12.03□□□□□ -0.48
HPS4-214ENST00000485842 GMEB2Q9UKD1 530 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 WASF2Q9Y6W5 498 aa12.03□□□□□ -0.48
HPS4-214ENST00000485842 SDK1Q7Z5N4 2213 aa12.02□□□□□ -0.48
HPS4-214ENST00000485842 FAM47DPA6NHR8 397 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 MEI4A8MW99 385 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 RNF103O00237 685 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 IGLV3-19P01714 112 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 UGT2B4P06133 528 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 MX2P20592 715 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ACSL1P33121 698 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms