RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 MRPL9Q9BYD2 267 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PANK2Q9BZ23 570 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TRIM9Q9C026 710 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 HAPLN2Q9GZV7 340 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PAIP1Q9H074 479 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM117Q9H0C3 514 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CCDC68Q9H2F9 335 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 SPATA6Q9NWH7 488 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ARHGAP20Q9P2F6 1191 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ZDHHC8Q9ULC8 765 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 RUVBL1Q9Y265 456 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TNFSF13BQ9Y275 285 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PCDHB2Q9Y5E7 798 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 MAGED1Q9Y5V3 778 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 HS3ST4Q9Y661 456 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 RALGAPA2Q2PPJ7 1873 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TRIP11Q15643 1979 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 FITM1A5D6W6 292 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 C5orf67F2Z3F1 127 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MYO1CO00159 1063 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 SLC16A4O15374 487 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 AHCYL1O43865 530 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PSPNO60542 156 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TOM1L1O75674 476 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PIGRP01833 764 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PFKFB1P16118 471 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 FGFR4P22455 802 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PROZP22891 400 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PCSK1P29120 753 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MAN2A2P49641 1150 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 AP2B1P63010 937 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ZBED6P86452 979 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TSPY1Q01534 308 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TAP1Q03518 808 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PRKCQQ04759 706 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MTM1Q13496 603 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 BTG3Q14201 252 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 KYAT1Q16773 422 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 HERC4Q5GLZ8 1057 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 UBXN11Q5T124 520 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ATF7IP2Q5U623 682 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 GRAMD4Q6IC98 578 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 GLB1LQ6UWU2 654 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 STXBP4Q6ZWJ1 553 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 HAUS6Q7Z4H7 955 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ABI1Q8IZP0 508 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ADSSL1Q8N142 457 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 LRRC43Q8N309 656 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 DCBLD1Q8N8Z6 715 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PDZD8Q8NEN9 1154 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 CSGALNACT1Q8TDX6 532 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ST8SIA4Q92187 359 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 P2RX5Q93086 422 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 DHX58Q96C10 678 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 CASD1Q96PB1 797 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TSPAN18Q96SJ8 248 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 FIZ1Q96SL8 496 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TACO1Q9BSH4 297 aaKnown RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 STRA6Q9BX79 667 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 GPR63Q9BZJ6 419 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TRIM6Q9C030 488 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PABPC3Q9H361 631 aaKnown RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM206Q9H813 350 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 UBE2ZQ9H832 354 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 PANK4Q9NVE7 773 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM160Q9NX00 188 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 SIDT1Q9NXL6 827 aaKnown RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 STK39Q9UEW8 545 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TRPS1Q9UHF7 1281 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 GPR160Q9UJ42 338 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 HOOK1Q9UJC3 728 aaKnown RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 EXOC7Q9UPT5 735 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 MTO1Q9Y2Z2 717 aaKnown RBP5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ACTL7AQ9Y615 435 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 ADGRA3Q8IWK6 1321 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 NLRC5Q86WI3 1866 aa5.87□□□□□ -1.47
NHLRC3-205ENST00000485407 TDRD15B5MCY1 1934 aaKnown RBP5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 A0A1B0GVL5 298 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 FAM170AA1A519 330 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 LINC01553A4QN01 128 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 TOR1BO14657 336 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 EIF3DO15371 548 aaKnown RBP eCLIP5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 CLDN3O15551 220 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 ZNF202O95125 648 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 EFEMP2O95967 443 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 CA3P07451 260 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 MCF2P10911 925 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 NPPBP16860 134 aa5.86□□□□□ -1.47
NHLRC3-205ENST00000485407 ATF7P17544 494 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms