RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MAGOHBQ96A72 148 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 C1QTNF1Q9BXJ1 281 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 C10orf88Q9H8K7 445 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 SUN2Q9UH99 717 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 DNPEPQ9ULA0 475 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 TTLL3Q9Y4R7 772 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 A0A1W2PQF6 199 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 TCRBV21S2A2A0A5A6 115 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 NEBLO76041 1014 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 SLU7O95391 586 aaKnown RBP20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCNCP24863 283 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 RECQLP46063 649 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CXCL12P48061 93 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 ZNF235Q14590 738 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CYTH1Q15438 398 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CYP1B1Q16678 543 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 INO80DQ53TQ3 878 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 OR6K2Q8NGY2 324 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 PTPRN2Q92932 1015 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCDC114Q96M63 670 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 TSGA13Q96PP4 275 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 KRT12Q99456 494 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 IER2Q9BTL4 223 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CEP41Q9BYV8 373 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 CEP44Q9C0F1 390 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 PRSS16Q9NQE7 514 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 HOMER3Q9NSC5 361 aa20.25■□□□□ 0.83
TRAPPC12-220ENST00000482645 PEX11BO96011 259 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 VASPP50552 380 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCR3P51677 355 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 BYSLQ13895 437 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 RFTN1Q14699 578 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCNG2Q16589 344 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 ATXN7L2Q5T6C5 722 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 C9orf64Q5T6V5 341 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 MARC1Q5VT66 337 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 TTC27Q6P3X3 843 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 METTL3Q86U44 580 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 DTWD2Q8NBA8 298 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 NOA1Q8NC60 698 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 TSEN2Q8NCE0 465 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 TSTD1Q8NFU3 115 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 CASKIN2Q8WXE0 1202 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 ZNF599Q96NL3 588 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 FRMD8P1Q9BZ68 369 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 POLMQ9NP87 494 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 CKAP5Q14008 2032 aa20.24■□□□□ 0.83
TRAPPC12-220ENST00000482645 CXorf51AA0A1B0GTR3 108 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 MATN3O15232 486 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 LAMTOR5O43504 91 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 ZNF821O75541 412 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 RBP3P10745 1247 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCNB1P14635 433 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 CHRNA3P32297 505 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 MMP13P45452 471 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 DGKEP52429 567 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 PRKD1Q15139 912 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 ANO7Q6IWH7 933 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 DARS2Q6PI48 645 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCDC137Q6PK04 289 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 STK40Q8N2I9 435 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 BBS5Q8N3I7 341 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 PCDH20Q8N6Y1 951 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 SLC35B2Q8TB61 432 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 HMGB4Q8WW32 186 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 QKIQ96PU8 341 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 BRD8Q9H0E9 1235 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 SLC6A17Q9H1V8 727 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 NT5MQ9NPB1 228 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 SEPT3Q9UH03 358 aa20.23■□□□□ 0.83
TRAPPC12-220ENST00000482645 JCHAINP01591 159 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 COILP38432 576 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 KCNJ1P48048 391 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 FNTAP49354 379 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 RENBPP51606 427 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 ITKQ08881 620 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 XRCC4Q13426 336 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 CAMK2GQ13555 558 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 KCTD19Q17RG1 926 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 SLC45A4Q5BKX6 768 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 CARD16Q5EG05 197 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 HEATR6Q6AI08 1181 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 TSSK4Q6SA08 328 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 DPY19L3Q6ZPD9 716 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 CDKL3Q8IVW4 592 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 C1orf210Q8IVY1 113 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 PGBD3Q8N328 593 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 OR2A12Q8NGT7 310 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 GRIN3AQ8TCU5 1115 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 RBM22Q9NW64 420 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 HECAQ9UBI9 543 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 LHX3Q9UBR4 397 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 FARP1Q9Y4F1 1045 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 CACNA1IQ9P0X4 2223 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 TARSL2A2RTX5 802 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 HACD1B0YJ81 288 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 MUSKO15146 869 aa20.22■□□□□ 0.83
TRAPPC12-220ENST00000482645 ZBTB24O43167 697 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms