RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 KIAA0100Q14667 2235 aaKnown RBP15.11■□□□□ 0.01
ATG4B-220ENST00000482507 AIM2O14862 343 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 GRID2O43424 1007 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 JCHAINP01591 159 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 NCAM1P13591 858 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 PIK3R1P27986 724 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 AVPR1AP37288 418 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 GRIA2P42262 883 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 GLRBP48167 497 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 POLE2P56282 527 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 GALNT2Q10471 571 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 PPP2R5DQ14738 602 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 LSM12Q3MHD2 195 aaKnown RBP15.11■□□□□ 0.01
ATG4B-220ENST00000482507 TAF2Q6P1X5 1199 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 BHLHA9Q7RTU4 235 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 SNX32Q86XE0 403 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 HOMEZQ8IX15 550 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 CNTD1Q8N815 330 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 EDEM1Q92611 657 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 NUP205Q92621 2012 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 ZNF419Q96HQ0 510 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-220ENST00000482507 GBP5Q96PP8 586 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 RHOBTB2Q9BYZ6 727 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 DDIT4Q9NX09 232 aa15.11■□□□□ 0.01
ATG4B-220ENST00000482507 TIMM13Q9Y5L4 95 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-220ENST00000482507 MYBPHLA2RUH7 354 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 UQCRBP14927 111 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 MSX2P35548 267 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-220ENST00000482507 GRIA4P48058 902 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 AFF1P51825 1210 aaKnown RBP15.1■□□□□ 0.01
ATG4B-220ENST00000482507 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
ATG4B-220ENST00000482507 ZNF460Q14592 562 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 ARL13AQ5H913 290 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-220ENST00000482507 TMEM198Q66K66 360 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 FBXL19Q6PCT2 694 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 ZC3HC1Q86WB0 502 aaKnown RBP15.1■□□□□ 0.01
ATG4B-220ENST00000482507 MFSD6LQ8IWD5 586 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 LSMEM2Q8N112 164 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 HDAC11Q96DB2 347 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 GPR22Q99680 433 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 TASP1Q9H6P5 420 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 ZDHHC2Q9UIJ5 367 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 TBC1D30Q9Y2I9 924 aa15.1■□□□□ 0.01
ATG4B-220ENST00000482507 TIMM44O43615 452 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 CABYRO75952 493 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 FBXO21O94952 628 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 FAM200BP0CF97 657 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 SLC35E2BP0CK96 405 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 VCLP18206 1134 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 NUDT2P50583 147 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 METTL21CQ5VZV1 264 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 ZYG11AQ6WRX3 759 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 ARHGAP36Q6ZRI8 547 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 DIS3LQ8TF46 1054 aaKnown RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 KCTD4Q8WVF5 259 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 TSEN34Q9BSV6 310 aaKnown RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 NUF2Q9BZD4 464 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 DRC3Q9H069 523 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 ILKAPQ9H0C8 392 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 SHROOM3Q8TF72 1996 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 CASQ2O14958 399 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 AP1G2O75843 785 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 PIGNO95427 931 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 HCAR3P49019 387 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 NPY2RP49146 381 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 NAGLUP54802 743 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 C11orf91Q3C1V1 193 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 FBXO46Q6PJ61 603 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 CENPLQ8N0S6 344 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 SPATA6LQ8N4H0 392 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 SPATA22Q8NHS9 363 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 USP33Q8TEY7 942 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 PCED1BQ96HM7 432 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 MARK4Q96L34 752 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 COLEC11Q9BWP8 271 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 UNKQ9C0B0 810 aaKnown RBP15.09■□□□□ 0.01
ATG4B-220ENST00000482507 ZNF385DQ9H6B1 395 aa15.09■□□□□ 0.01
ATG4B-220ENST00000482507 ERI2A8K979 691 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 TARM1B6A8C7 271 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 C9IYK1 514 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 HDAC3O15379 428 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 LRIG2O94898 1065 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 AHSGP02765 367 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 AXLP30530 894 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 DPP6P42658 865 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 THOP1P52888 689 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 ROR2Q01974 943 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 NSUN2Q08J23 767 aaKnown RBP eCLIP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 PDZD4Q76G19 769 aaPredicted RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 FAM35AQ86V20 835 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 SLC41A1Q8IVJ1 513 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 CNDP1Q96KN2 507 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 PPP1R10Q96QC0 940 aaKnown RBP15.08■□□□□ 0.01
ATG4B-220ENST00000482507 FAM192AQ9GZU8 254 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 IL22Q9GZX6 179 aa15.08■□□□□ 0.01
ATG4B-220ENST00000482507 OR12D3Q9UGF7 316 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms