RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CHST14Q8NCH0 376 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 CLDN23Q96B33 292 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 ZNF419Q96HQ0 510 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 OSBPL6Q9BZF3 934 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 LHX3Q9UBR4 397 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 LRRK1Q38SD2 2015 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 NUMA1Q14980 2115 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 EDDM13A0A1B0GTR0 161 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 ESPNB1AK53 854 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 RNF103O00237 685 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 KRIT1O00522 736 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 MATN3O15232 486 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 INSIG1O15503 277 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 LIASO43766 372 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 IGSF6O95976 241 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PEX11BO96011 259 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 KCNJ1P48048 391 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PSMD8P48556 350 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PXNP49023 591 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 SLC20A2Q08357 652 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 DNTTIP2Q5QJE6 756 aaKnown RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PRUNE1Q86TP1 453 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PGBD3Q8N328 593 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 BBS5Q8N3I7 341 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PGBD5Q8N414 524 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 FAM71DQ8N9W8 422 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 FRS2Q8WU20 508 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 HMGB4Q8WW32 186 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 MAIP1Q8WWC4 291 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 HTR3CQ8WXA8 447 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 TSGA13Q96PP4 275 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 NAP1L3Q99457 506 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 GABRG3Q99928 467 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 TMEM121Q9BTD3 319 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 PRSS16Q9NQE7 514 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 RBM22Q9NW64 420 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 KLHL8Q9P2G9 620 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 HECAQ9UBI9 543 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 SEPT3Q9UH03 358 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-208ENST00000482310 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
HDAC1-208ENST00000482310 A0A1W2PQF6 199 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 HACD1B0YJ81 288 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PDE2AO00408 941 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CES2O00748 559 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 NPC1O15118 1278 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 ATG13O75143 517 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 ZNF821O75541 412 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PIGNO95427 931 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PTPN3P26045 913 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 RPS9P46781 194 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 SCNN1BP51168 640 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CLCN5P51795 746 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CCNHP51946 323 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 TERF1P54274 439 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 GDF10P55107 478 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 SNRPD1P62314 119 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 DSC2Q02487 901 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 XRCC4Q13426 336 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 BYSLQ13895 437 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 E2F5Q15329 346 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CARD16Q5EG05 197 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 C9orf64Q5T6V5 341 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 ANO7Q6IWH7 933 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 TSSK4Q6SA08 328 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 DPY19L3Q6ZPD9 716 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CREG2Q8IUH2 290 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 LRRC49Q8IUZ0 686 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 MMAAQ8IVH4 418 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PCDH20Q8N6Y1 951 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 PRELID2Q8N945 189 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 TSTD1Q8NFU3 115 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 OR2A12Q8NGT7 310 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 MAML1Q92585 1016 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 MAGOHBQ96A72 148 aaKnown RBP13.43□□□□□ -0.26
HDAC1-208ENST00000482310 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 CEP44Q9C0F1 390 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 DLGAP2Q9P1A6 1054 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 SUN2Q9UH99 717 aa13.43□□□□□ -0.26
HDAC1-208ENST00000482310 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
HDAC1-208ENST00000482310 GOLGA6L10A0A0M3HER8 536 aa13.42□□□□□ -0.26
HDAC1-208ENST00000482310 CHURC1-FNTBB4DL54 471 aa13.42□□□□□ -0.26
HDAC1-208ENST00000482310 PLK4O00444 970 aa13.42□□□□□ -0.26
HDAC1-208ENST00000482310 IFNB1P01574 187 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms