RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CCNHP51946 323 aaPredicted RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 ARF5P84085 180 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 SCYL2Q6P3W7 929 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 DPY19L3Q6ZPD9 716 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 TMEM145Q8NBT3 493 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 DENND6BQ8NEG7 585 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 OR7D4Q8NG98 312 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 HCAR2Q8TDS4 363 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ASB12Q8WXK4 309 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 CAMK1GQ96NX5 476 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 USP29Q9HBJ7 922 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 TMEM63CQ9P1W3 806 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ARHGAP20Q9P2F6 1191 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 HECAQ9UBI9 543 aaPredicted RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 SARDHQ9UL12 918 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 HS3ST3A1Q9Y663 406 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ACACBO00763 2458 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 ADAMTS9Q9P2N4 1935 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 A0A1W2PQJ5 194 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 A0A1W2PQU0 124 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 LRRC53A6NM62 1247 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 H3BM21 787 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 NEMP1O14524 444 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 CCP110O43303 1012 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 SMAD6O43541 496 aaKnown RBP11.65□□□□□ -0.54
CCM2-213ENST00000480658 KDELR3O43731 214 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 CTSLP07711 333 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 NFKBIAP25963 317 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 RABIFP47224 123 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 DNA2P51530 1060 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 NDST2P52849 883 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 TPI1P60174 286 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 PPP2CBP62714 309 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 PPP2CAP67775 309 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 SGCGQ13326 291 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 ZNF805Q5CZA5 627 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 LINGO4Q6UY18 593 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 TMPRSS7Q7RTY8 843 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 TMC6Q7Z403 805 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 TMPRSS12Q86WS5 348 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 UMODL1-AS1Q8N2C9 162 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
CCM2-213ENST00000480658 LZTR1Q8N653 840 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 CCDC185Q8N715 623 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 JOSD2Q8TAC2 188 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
CCM2-213ENST00000480658 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
CCM2-213ENST00000480658 PCDHB18PQ96TA0 734 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 DUSP23Q9BVJ7 150 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 HSD3B7Q9H2F3 369 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 ZDHHC6Q9H6R6 413 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 WASF2Q9Y6W5 498 aa11.65□□□□□ -0.54
CCM2-213ENST00000480658 TCRBV5S1A1TA0A578 114 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 ARHGAP42A6NI28 874 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 K7ERQ8 282 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 FPGTO14772 594 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 BUB1O43683 1085 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 RFPL3O75679 317 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 LDOC1O95751 146 aaPredicted RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 PSMA2P25787 234 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 MAT2AP31153 395 aaKnown RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 PTK2BQ14289 1009 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 RFTN1Q14699 578 aaPredicted RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 ZNF284Q2VY69 593 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 CFAP58Q5T655 872 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 KYAT3Q6YP21 454 aaKnown RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 CCNI2Q6ZMN8 369 aaPredicted RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 CHCHD4Q8N4Q1 142 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 BAP1Q92560 729 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 TMEM121BQ9BXQ6 578 aaPredicted RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 TTYH3Q9C0H2 523 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 TNKS2Q9H2K2 1166 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 ZWILCHQ9H900 591 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 EBF2Q9HAK2 575 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 KLHL11Q9NVR0 708 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 DKK3Q9UBP4 350 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 DKK4Q9UBT3 224 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 KLK13Q9UKR3 277 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 FZD10Q9ULW2 581 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms