RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CCNHP51946 323 aaPredicted RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 DYNLT1P63172 113 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 ADCY2Q08462 1091 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 PPIDQ08752 370 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 SFSWAPQ12872 951 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 HNRNPDQ14103 355 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 LBRQ14739 615 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 PDK1Q15118 436 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 RPS6KA1Q15418 735 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 MAP7D1Q3KQU3 841 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 TTC31Q49AM3 519 aaPredicted RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 DCAF12L1Q5VU92 463 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 FAM46CQ5VWP2 391 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 C11orf74Q86VG3 221 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 MMAAQ8IVH4 418 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 NSMCE1Q8WV22 266 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 MAML1Q92585 1016 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 LRIG1Q96JA1 1093 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 SPACA7Q96KW9 195 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 PSKH2Q96QS6 385 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 CINPQ9BW66 212 aaPredicted RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 PABPC3Q9H361 631 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 KCND1Q9NSA2 647 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 SEPT3Q9UH03 358 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 C1QTNF3-AMACRE9PGA6 284 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 APOC4-APOC2K7ER74 178 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 MATN3O15232 486 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 RPP40O75818 363 aaKnown RBP20.05■□□□□ 0.8
LIME1-205ENST00000480139 TJP3O95049 919 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 APOC2P02655 101 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 C5AR1P21730 350 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 CHRNA3P32297 505 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 CSNK1DP48730 415 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 RENBPP51606 427 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 NSUN2Q08J23 767 aaKnown RBP eCLIP20.05■□□□□ 0.8
LIME1-205ENST00000480139 SLC10A7Q0GE19 358 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 NPNTQ6UXI9 565 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 USP30Q70CQ3 517 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 TEX26Q8N6G2 289 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 P3H4Q92791 437 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 ATOH1Q92858 354 aaPredicted RBP20.05■□□□□ 0.8
LIME1-205ENST00000480139 HEPHQ9BQS7 1158 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 HEMGNQ9BXL5 484 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 TM6SF2Q9BZW4 377 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 CARD9Q9H257 536 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 TRMT1Q9NXH9 659 aaKnown RBP20.05■□□□□ 0.8
LIME1-205ENST00000480139 IL36AQ9UHA7 158 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 AMACRQ9UHK6 382 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 WASF2Q9Y6W5 498 aa20.05■□□□□ 0.8
LIME1-205ENST00000480139 HRO43593 1189 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 BNIP3LO60238 219 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 KIF5CO60282 957 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 MAP3K6O95382 1288 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 POP4O95707 220 aaKnown RBP20.04■□□□□ 0.8
LIME1-205ENST00000480139 IL1BP01584 269 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 CTSLP07711 333 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 PECAM1P16284 738 aaPredicted RBP20.04■□□□□ 0.8
LIME1-205ENST00000480139 MSNP26038 577 aaKnown RBP20.04■□□□□ 0.8
LIME1-205ENST00000480139 OXTRP30559 389 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 NBL1P41271 181 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 DNA2P51530 1060 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 TPMTP51580 245 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 MARC1Q5VT66 337 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 KBTBD6Q86V97 674 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 CCDC13Q8IYE1 715 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 CHST14Q8NCH0 376 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 PIP4K2CQ8TBX8 421 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 HERPUD2Q9BSE4 406 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 TLR10Q9BXR5 811 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 SEMA4AQ9H3S1 761 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 JRKLQ9Y4A0 524 aa20.04■□□□□ 0.8
LIME1-205ENST00000480139 USP27XA6NNY8 438 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 SLC8A1P32418 973 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 PSMD8P48556 350 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 RAD51Q06609 339 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 ZNF211Q13398 564 aaPredicted RBP20.03■□□□□ 0.8
LIME1-205ENST00000480139 ZNF235Q14590 738 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 GRM3Q14832 879 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 LLGL1Q15334 1064 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 MYLK3Q32MK0 819 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 CACUL1Q86Y37 369 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 TSEN2Q8NCE0 465 aaKnown RBP20.03■□□□□ 0.8
LIME1-205ENST00000480139 CCNYQ8ND76 341 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 FAM131CQ96AQ9 280 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 VOPP1Q96AW1 172 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 LGMNQ99538 433 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 OSBPL1AQ9BXW6 950 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 CPEB1Q9BZB8 566 aaKnown RBP20.03■□□□□ 0.8
LIME1-205ENST00000480139 EPC1Q9H2F5 836 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 HAUS2Q9NVX0 235 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 SARDHQ9UL12 918 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 FZD4Q9ULV1 537 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 R4GN57 208 aa20.03■□□□□ 0.8
LIME1-205ENST00000480139 IGHV1OR15-9A0A0B4J2B8 117 aa20.02■□□□□ 0.8
LIME1-205ENST00000480139 MID1O15344 667 aa20.02■□□□□ 0.8
LIME1-205ENST00000480139 LEFTY1O75610 366 aa20.02■□□□□ 0.8
LIME1-205ENST00000480139 MMP13P45452 471 aa20.02■□□□□ 0.8
LIME1-205ENST00000480139 MAPK8P45983 427 aa20.02■□□□□ 0.8
LIME1-205ENST00000480139 IFI35P80217 286 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms