RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 STXBP5Q5T5C0 1151 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 NUGGCQ68CJ6 796 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ADAT2Q7Z6V5 191 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 KIAA1328Q86T90 577 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MIB1Q86YT6 1006 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 UNC45BQ8IWX7 931 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 RHOT2Q8IXI1 618 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 DEFB106AQ8N104 65 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ATP6V0D2Q8N8Y2 350 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 FEZF2Q8TBJ5 459 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MAGEC3Q8TD91 643 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 BPIFB1Q8TDL5 484 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SH3RF2Q8TEC5 729 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 RNF141Q8WVD5 230 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 NDRG1Q92597 394 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MCEEQ96PE7 176 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SLC2A13Q96QE2 648 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 DDX50Q9BQ39 737 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TUBB2BQ9BVA1 445 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 DUSP23Q9BVJ7 150 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SMOC2Q9H3U7 446 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 NMUR1Q9HB89 426 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 HOMER3Q9NSC5 361 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 DDIT4Q9NX09 232 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SMPD4Q9NXE4 827 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TAS2R14Q9NYV8 317 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TBC1D14Q9P2M4 693 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 UVRAGQ9P2Y5 699 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MYO1AQ9UBC5 1043 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ZC3H7BQ9UGR2 993 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TPX2Q9ULW0 747 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 NAALADL1Q9UQQ1 740 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF451Q9Y4E5 1061 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 EPN1Q9Y6I3 576 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SZT2Q5T011 3432 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SYNJ2BP-COX16A0A087WUM0 186 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 E2F8A0AVK6 867 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TYW5A2RUC4 315 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC151A5D8V7 595 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 HEPACAM2A8MVW5 462 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ANHXE9PGG2 379 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 M0QYT0 321 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF263O14978 683 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SHOXO15266 292 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 LEFTY1O75610 366 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 RNF8O76064 485 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 LATS1O95835 1130 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TRUB2O95900 331 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CYBBP04839 570 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 HMBSP08397 361 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 RRM1P23921 792 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CCR1P32246 355 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 RDXP35241 583 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ADMP35318 185 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PTPN9P43378 593 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SLC11A2P49281 568 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 GALCP54803 685 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TBX4P57082 545 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 AMPD2Q01433 879 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PFKPQ01813 784 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ZP2Q05996 745 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DEUP1Q05D60 604 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PTP4A2Q12974 167 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 NME3Q13232 169 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TDGQ13569 410 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 HTR4Q13639 388 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 MTF1Q14872 753 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SLMAPQ14BN4 828 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ACAP1Q15027 740 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 BRD3Q15059 726 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PDGFRLQ15198 375 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 IFI16Q16666 785 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ASTE1Q2TB18 679 aaPredicted RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SLC25A52Q3SY17 297 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 C2CD6Q53TS8 623 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DNAJC21Q5F1R6 531 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 BRMS1LQ5PSV4 323 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ACBD5Q5T8D3 534 aaPredicted RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PLEKHA7Q6IQ23 1121 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PARM1Q6UWI2 310 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 STRADAQ7RTN6 431 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 BHLHA9Q7RTU4 235 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ZAR1Q86SH2 424 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PHLDB2Q86SQ0 1253 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TAC4Q86UU9 113 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC50Q8IVM0 306 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 MFSD6LQ8IWD5 586 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 LRRC8AQ8IWT6 810 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CSGALNACT1Q8TDX6 532 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DQX1Q8TE96 717 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 RXFP2Q8WXD0 754 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 USP13Q92995 863 aaPredicted RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ATP2A3Q93084 1043 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 MIEF2Q96C03 454 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 OTUB2Q96DC9 234 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms