RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PABPC3Q9H361 631 aaKnown RBP25.43■■□□□ 1.66
PERM1-203ENST00000479361 HECAQ9UBI9 543 aaPredicted RBP25.43■■□□□ 1.66
PERM1-203ENST00000479361 SEPT3Q9UH03 358 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 IL36AQ9UHA7 158 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 PPM1HQ9ULR3 514 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 PACSIN2Q9UNF0 486 aaPredicted RBP25.43■■□□□ 1.66
PERM1-203ENST00000479361 CYP8B1Q9UNU6 501 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 INVSQ9Y283 1065 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 NCKAP1Q9Y2A7 1128 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 EFR3BQ9Y2G0 817 aa25.43■■□□□ 1.66
PERM1-203ENST00000479361 CST8O60676 142 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 IGSF6O95976 241 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 IGLV3-19P01714 112 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 TGM2P21980 687 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 PTPN7P35236 360 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 CCNHP51946 323 aaPredicted RBP25.42■■□□□ 1.66
PERM1-203ENST00000479361 LBRQ14739 615 aaKnown RBP25.42■■□□□ 1.66
PERM1-203ENST00000479361 CYTH1Q15438 398 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 SLC36A4Q6YBV0 504 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 USP30Q70CQ3 517 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 BBS5Q8N3I7 341 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 RYBPQ8N488 228 aaPredicted RBP25.42■■□□□ 1.66
PERM1-203ENST00000479361 TMIEQ8NEW7 156 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 TSGA13Q96PP4 275 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 HEPHQ9BQS7 1158 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 RAB23Q9ULC3 237 aa25.42■■□□□ 1.66
PERM1-203ENST00000479361 NYNRINQ9P2P1 1898 aaKnown RBP25.41■■□□□ 1.66
PERM1-203ENST00000479361 MID1O15344 667 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 MAP3K13O43283 966 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 MAP3K6O95382 1288 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 POP4O95707 220 aaKnown RBP25.41■■□□□ 1.66
PERM1-203ENST00000479361 CCNCP24863 283 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 RAD51Q06609 339 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 SLC10A2Q12908 348 aaPredicted RBP25.41■■□□□ 1.66
PERM1-203ENST00000479361 PDK1Q15118 436 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 KBTBD6Q86V97 674 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 CHST14Q8NCH0 376 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 CCNYQ8ND76 341 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 PIP4K2CQ8TBX8 421 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 GANCQ8TET4 914 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 FATE1Q969F0 183 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 HDAC11Q96DB2 347 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 LRIG1Q96JA1 1093 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 OMDQ99983 421 aa25.41■■□□□ 1.66
PERM1-203ENST00000479361 IGHV1OR15-9A0A0B4J2B8 117 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 PPP1R12AO14974 1030 aaPredicted RBP25.4■■□□□ 1.66
PERM1-203ENST00000479361 DDX3YO15523 660 aaKnown RBP25.4■■□□□ 1.66
PERM1-203ENST00000479361 PYGMP11217 842 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 CD6P30203 668 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 HSPA9P38646 679 aaKnown RBP25.4■■□□□ 1.66
PERM1-203ENST00000479361 RENBPP51606 427 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 ZNF235Q14590 738 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 LLGL1Q15334 1064 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 ELF2Q15723 593 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 MYLK3Q32MK0 819 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 MARC1Q5VT66 337 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 PRR23BQ6ZRT6 265 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 FAM160A2Q8N612 972 aaPredicted RBP25.4■■□□□ 1.66
PERM1-203ENST00000479361 GRIN3AQ8TCU5 1115 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 P3H4Q92791 437 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 PSKH2Q96QS6 385 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 OSBPL8Q9BZF1 889 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 BRD8Q9H0E9 1235 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 HAUS2Q9NVX0 235 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 FBXL12Q9NXK8 326 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 LHX3Q9UBR4 397 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 FANCMQ8IYD8 2048 aa25.4■■□□□ 1.66
PERM1-203ENST00000479361 PEX11BO96011 259 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 CTSLP07711 333 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 ZNF33AQ06730 810 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 SLC10A7Q0GE19 358 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 CCDC15Q0P6D6 951 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 HNRNPDQ14103 355 aaKnown RBP25.39■■□□□ 1.66
PERM1-203ENST00000479361 RPS6KA1Q15418 735 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 ARSIQ5FYB1 569 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 ATXN7L2Q5T6C5 722 aaPredicted RBP25.39■■□□□ 1.66
PERM1-203ENST00000479361 MEI1Q5TIA1 1274 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 CCDC181Q5TID7 509 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 BBS12Q6ZW61 710 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 REXO1L1PQ8IX06 675 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 TSEN2Q8NCE0 465 aaKnown RBP25.39■■□□□ 1.66
PERM1-203ENST00000479361 PPP1R16AQ96I34 528 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 ZC3H10Q96K80 434 aaKnown RBP25.39■■□□□ 1.66
PERM1-203ENST00000479361 HEMGNQ9BXL5 484 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 ZDHHC6Q9H6R6 413 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 DYRK4Q9NR20 520 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 SARDHQ9UL12 918 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 FZD4Q9ULV1 537 aa25.39■■□□□ 1.66
PERM1-203ENST00000479361 PROB1E7EW31 1015 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 KPNA3O00505 521 aaPredicted RBP25.38■■□□□ 1.65
PERM1-203ENST00000479361 KRIT1O00522 736 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 MATN3O15232 486 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 NDUFS2O75306 463 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 LEFTY1O75610 366 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 RNASEH2AO75792 299 aaKnown RBP25.38■■□□□ 1.65
PERM1-203ENST00000479361 RHOBTB1O94844 696 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 TJP3O95049 919 aa25.38■■□□□ 1.65
PERM1-203ENST00000479361 PPIDQ08752 370 aaKnown RBP25.38■■□□□ 1.65
PERM1-203ENST00000479361 NSUN2Q08J23 767 aaKnown RBP eCLIP25.38■■□□□ 1.65
PERM1-203ENST00000479361 GRM3Q14832 879 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms