RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 UBAP2LQ14157 1087 aaKnown RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 GPNMBQ14956 572 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ANKRD20A4Q4UJ75 823 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 SPANXN3Q5MJ09 141 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ARTNQ5T4W7 220 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 N4BP2L1Q5TBK1 243 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 C6orf163Q5TEZ5 329 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 C1orf228Q6PIY5 440 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 KCNT2Q6UVM3 1135 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 SCARA5Q6ZMJ2 495 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CCDC117Q8IWD4 279 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 UNC5BQ8IZJ1 945 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 FBXW8Q8N3Y1 598 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ANKRD52Q8NB46 1076 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 GSTCDQ8NEC7 633 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 RDH11Q8TC12 318 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 GDPD5Q8WTR4 605 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 HTR3CQ8WXA8 447 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CMTM5Q96DZ9 223 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PGAP3Q96FM1 320 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 CFAP36Q96G28 342 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CLPTM1LQ96KA5 538 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PRICKLE1Q96MT3 831 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 SLC2A13Q96QE2 648 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 RBBP8Q99708 897 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CPNE1Q99829 537 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 THTPAQ9BU02 230 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CDH19Q9H159 772 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 EBF3Q9H4W6 596 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ZNF696Q9H7X3 374 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CASS4Q9NQ75 786 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PRDM6Q9NQX0 595 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ZNF358Q9NW07 568 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 GDAP2Q9NXN4 497 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ETAA1Q9NY74 926 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TMEM216Q9P0N5 145 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 C6orf203Q9P0P8 240 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 NXF1Q9UBU9 619 aaKnown RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 RIMS3Q9UJD0 308 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 FZD10Q9ULW2 581 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PSMD13Q9UNM6 376 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TSC2P49815 1807 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 MAGEB16A2A368 324 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 MBLAC1A4D2B0 266 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 LINC01553A4QN01 128 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 EPOPA6NHQ4 379 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ERI2A8K979 691 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 RFXAPO00287 272 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 MATN2O00339 956 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PIRO00625 290 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ACOT8O14734 319 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TPP1O14773 563 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 DCLK1O15075 740 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 DNAJA2O60884 412 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 USP1O94782 785 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ARHGEF15O94989 841 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TOP3BO95985 862 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 MPOP05164 745 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 SRGAP2CP0DJJ0 459 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 COX4I1P13073 169 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 TFE3P19532 575 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 GSTT1P30711 240 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 SDC4P31431 198 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 HADHAP40939 763 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ACADSBP45954 432 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PHKA2P46019 1235 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 CPA2P48052 419 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 AIF1P55008 147 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 SNX16P57768 344 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ADAM17P78536 824 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 SARNPP82979 210 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 SLC25A3Q00325 362 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ZNF33AQ06730 810 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TBL3Q12788 808 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 DPYSQ14117 519 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ZNF423Q2M1K9 1284 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TIGD5Q53EQ6 642 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PIGGQ5H8A4 983 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ZFYVE27Q5T4F4 411 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 OR6B2Q6IFH4 312 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 C8orf82Q6P1X6 216 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 ZFP1Q6P2D0 407 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.98□□□□□ -1.29
UBR4-212ENST00000475973 FRMD7Q6ZUT3 714 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 RAPH1Q70E73 1250 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 CHSY3Q70JA7 882 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TMCO2Q7Z6W1 182 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 CNTN4Q8IWV2 1026 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 CTAGE3PQ8IX95 158 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 AHI1Q8N157 1196 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 LRRC71Q8N4P6 559 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 DRAXINQ8NBI3 349 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms