RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CPEB1Q9BZB8 566 aaKnown RBP17.22■□□□□ 0.35
SCAF11-206ENST00000474828 CD93Q9NPY3 652 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 AMFRQ9UKV5 643 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 DFFAO00273 331 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 PRNPP04156 253 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 CR2P20023 1033 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 MX2P20592 715 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 BCKDHBP21953 392 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 CCNCP24863 283 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 SLC8A1P32418 973 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 NR2C2P49116 596 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 CCNHP51946 323 aaPredicted RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 NAP1L1P55209 391 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 RWDD2BP57060 319 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 SNRPD1P62314 119 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 ADCY2Q08462 1091 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 SFSWAPQ12872 951 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 HNRNPDQ14103 355 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 FAM46CQ5VWP2 391 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 ALG1LQ6GMV1 187 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 KIAA1324Q6UXG2 1013 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 BBS12Q6ZW61 710 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 REXO1L1PQ8IX06 675 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 NETO2Q8NC67 525 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 CHST14Q8NCH0 376 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 CADM4Q8NFZ8 388 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 RLN3Q8WXF3 142 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 SPACA7Q96KW9 195 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 HEPHQ9BQS7 1158 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 TNKS2Q9H2K2 1166 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 AMACRQ9UHK6 382 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 GUCA1BQ9UMX6 200 aa17.21■□□□□ 0.35
SCAF11-206ENST00000474828 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.35
SCAF11-206ENST00000474828 RNF103O00237 685 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 APOL1O14791 398 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 MATN3O15232 486 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 MID1O15344 667 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SLC7A4O43246 635 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 POP4O95707 220 aaKnown RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 DNTTP04053 509 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 TGM2P21980 687 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 CD6P30203 668 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 HSPA9P38646 679 aaKnown RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 PPIDQ08752 370 aaKnown RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 MYLK3Q32MK0 819 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 TTC31Q49AM3 519 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 ATPAF2Q8N5M1 289 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 FAM160A2Q8N612 972 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 PIP4K2CQ8TBX8 421 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 HCAR2Q8TDS4 363 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 NKD2Q969F2 451 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF419Q96HQ0 510 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 GDAP1L1Q96MZ0 367 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 HDAC8Q9BY41 377 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 BRD8Q9H0E9 1235 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SP110Q9HB58 689 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 HECAQ9UBI9 543 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SERGEFQ9UGK8 458 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 IL36AQ9UHA7 158 aa17.2■□□□□ 0.34
SCAF11-206ENST00000474828 SMG5Q9UPR3 1016 aaKnown RBP17.2■□□□□ 0.34
SCAF11-206ENST00000474828 PRR23AA6NEV1 266 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 C1QTNF3-AMACRE9PGA6 284 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 LMNAP02545 664 aaKnown RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 PYGMP11217 842 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 ACADMP11310 421 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 KRT10P13645 584 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 RECQLP46063 649 aaPredicted RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 LBRQ14739 615 aaKnown RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 RALGPS1Q5JS13 557 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 MEI1Q5TIA1 1274 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 DCAF12L1Q5VU92 463 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 PEAR1Q5VY43 1037 aaPredicted RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 LAIR1Q6GTX8 287 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 LEKR1Q6ZMV7 388 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 ERLEC1Q96DZ1 483 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 HERPUD2Q9BSE4 406 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 OSBPL1AQ9BXW6 950 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 MAK16Q9BXY0 300 aaKnown RBP17.19■□□□□ 0.34
SCAF11-206ENST00000474828 KDM4CQ9H3R0 1056 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 SGK2Q9HBY8 427 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 CYP8B1Q9UNU6 501 aa17.19■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF292O60281 2723 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TSPAN11A1L157 253 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 MUSKO15146 869 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 CST8O60676 142 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 LEFTY1O75610 366 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 FTCDO95954 541 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms