RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TRIM58Q8NG06 486 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 ALG3Q92685 438 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 FATE1Q969F0 183 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 HES6Q96HZ4 224 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 LRIG1Q96JA1 1093 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 GDAP1L1Q96MZ0 367 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 HEPHQ9BQS7 1158 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 TM6SF2Q9BZW4 377 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 SEPT3Q9UH03 358 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 CYP8B1Q9UNU6 501 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 INVSQ9Y283 1065 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 NCKAP1Q9Y2A7 1128 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 IGHV1OR15-9A0A0B4J2B8 117 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 MAP3K13O43283 966 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 CST8O60676 142 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 IGSF6O95976 241 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 KRT10P13645 584 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 TGM2P21980 687 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 CCNCP24863 283 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 CD6P30203 668 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 PTPN7P35236 360 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 RENBPP51606 427 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 CCNHP51946 323 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 SLC10A2Q12908 348 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 LBRQ14739 615 aaKnown RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 MYLK3Q32MK0 819 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 TIGD7Q6NT04 549 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 KBTBD6Q86V97 674 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 RYBPQ8N488 228 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 CHST14Q8NCH0 376 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 ZC3H10Q96K80 434 aaKnown RBP21.12■□□□□ 0.97
TOP3A-204ENST00000472959 BRD8Q9H0E9 1235 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 LHX3Q9UBR4 397 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 IL36AQ9UHA7 158 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 RAB23Q9ULC3 237 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 HEY1Q9Y5J3 304 aa21.12■□□□□ 0.97
TOP3A-204ENST00000472959 MID1O15344 667 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 DDX3YO15523 660 aaKnown RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 PEX11BO96011 259 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 HSPA9P38646 679 aaKnown RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 DYNLT1P63172 113 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 RAD51Q06609 339 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 ZNF33AQ06730 810 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 NSUN2Q08J23 767 aaKnown RBP eCLIP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 PDK1Q15118 436 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 SPDYCQ5MJ68 293 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 KAZNQ674X7 775 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 PRR23BQ6ZRT6 265 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 BBS5Q8N3I7 341 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 FAM160A2Q8N612 972 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 PIP4K2CQ8TBX8 421 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 GANCQ8TET4 914 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 NKD2Q969F2 451 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 HDAC11Q96DB2 347 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 PSKH2Q96QS6 385 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 OMDQ99983 421 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 CINPQ9BW66 212 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 FBXL12Q9NXK8 326 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 MBD1Q9UIS9 605 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-204ENST00000472959 SARDHQ9UL12 918 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 FZD4Q9ULV1 537 aa21.11■□□□□ 0.97
TOP3A-204ENST00000472959 RHOBTB1O94844 696 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 CTSLP07711 333 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 PYGMP11217 842 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 CSNK1DP48730 415 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 SLC10A7Q0GE19 358 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 CCDC15Q0P6D6 951 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 HNRNPDQ14103 355 aaKnown RBP21.1■□□□□ 0.97
TOP3A-204ENST00000472959 ELF2Q15723 593 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 PLK5Q496M5 336 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 ARSIQ5FYB1 569 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 ATXN7L2Q5T6C5 722 aaPredicted RBP21.1■□□□□ 0.97
TOP3A-204ENST00000472959 MARC1Q5VT66 337 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 BBS12Q6ZW61 710 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 FRMD1Q8N878 549 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 TOE1Q96GM8 510 aaKnown RBP21.1■□□□□ 0.97
TOP3A-204ENST00000472959 OLFM3Q96PB7 478 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 OSBPL8Q9BZF1 889 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 SGK2Q9HBY8 427 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 WSB2Q9NYS7 404 aaPredicted RBP21.1■□□□□ 0.97
TOP3A-204ENST00000472959 PACSIN2Q9UNF0 486 aaPredicted RBP21.1■□□□□ 0.97
TOP3A-204ENST00000472959 WASF2Q9Y6W5 498 aa21.1■□□□□ 0.97
TOP3A-204ENST00000472959 NUP205Q92621 2012 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 KRIT1O00522 736 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 PPP1R12AO14974 1030 aaPredicted RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 MATN3O15232 486 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 NDUFS2O75306 463 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 LEFTY1O75610 366 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 RNASEH2AO75792 299 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 MAP3K6O95382 1288 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 LMNAP02545 664 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 BCKDHBP21953 392 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 PPIDQ08752 370 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 ZNF235Q14590 738 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 GRM3Q14832 879 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 LLGL1Q15334 1064 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 RPS6KA1Q15418 735 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 MEI1Q5TIA1 1274 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 LPCAT2Q7L5N7 544 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 REXO1L1PQ8IX06 675 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms