RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SLC45A4Q5BKX6 768 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 SDE2Q6IQ49 451 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 DPY19L3Q6ZPD9 716 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 BZW1Q7L1Q6 419 aaKnown RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 CREG2Q8IUH2 290 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 STK40Q8N2I9 435 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TEX26Q8N6G2 289 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TFB1MQ8WVM0 346 aaKnown RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 HHIPQ96QV1 700 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 FAM129BQ96TA1 746 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 CEP44Q9C0F1 390 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 SPATA6Q9NWH7 488 aaPredicted RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 SEPT10Q9P0V9 454 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TTC7AQ9ULT0 858 aaPredicted RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 SAR1BQ9Y6B6 198 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TCRBV21S2A2A0A5A6 115 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 K7ESF4 209 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 PGRMC1O00264 195 aaKnown RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 PDE2AO00408 941 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 MCF2LO15068 1137 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 INSIG1O15503 277 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 LIASO43766 372 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 ATG13O75143 517 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 JCHAINP01591 159 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 HLA-DQB2P05538 268 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 CTSLP07711 333 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 CCNB1P14635 433 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 MMP13P45452 471 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 PXNP49023 591 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 METAP1P53582 386 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 MAXP61244 160 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 IFI35P80217 286 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 WASHC5Q12768 1159 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 XRCC4Q13426 336 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 SNX1Q13596 522 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 TIGD7Q6NT04 549 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 TSSK4Q6SA08 328 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 CACUL1Q86Y37 369 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 MAML2Q8IZL2 1156 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 PCDH20Q8N6Y1 951 aaKnown RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 CNTD1Q8N815 330 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 PRELID2Q8N945 189 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 DTWD2Q8NBA8 298 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 TTC13Q8NBP0 860 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 ACTRT1Q8TDG2 376 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 CASKIN2Q8WXE0 1202 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 FATE1Q969F0 183 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 ISG20Q96AZ6 181 aaKnown RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 IL12RB2Q99665 862 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 CINPQ9BW66 212 aaPredicted RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 MKRN2Q9H000 416 aaKnown RBP15.02■□□□□ -0
COL9A3-209ENST00000469852 NT5MQ9NPB1 228 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 SUN2Q9UH99 717 aa15.02■□□□□ -0
COL9A3-209ENST00000469852 ANKRD36A6QL64 1941 aa15.02□□□□□ -0.01
COL9A3-209ENST00000469852 USP34Q70CQ2 3546 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 TARSL2A2RTX5 802 aaKnown RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 HACD1B0YJ81 288 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 SYNCRIPO60506 623 aaKnown RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 GSRP00390 522 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 GABRG2P18507 467 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 PTPN3P26045 913 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 CXCL12P48061 93 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 CCNHP51946 323 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 PTPN5P54829 565 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 GDF10P55107 478 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 ZNF33AQ06730 810 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 DMWDQ09019 674 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 HNRNPDQ14103 355 aaKnown RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 ZNF235Q14590 738 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 IHHQ14623 411 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 RFTN1Q14699 578 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 OASLQ15646 514 aaKnown RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 CARD16Q5EG05 197 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 MARC1Q5VT66 337 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 DARS2Q6PI48 645 aaKnown RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 CDKL3Q8IVW4 592 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 OR2AP1Q8NGE2 309 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 HTR3CQ8WXA8 447 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 ZNF592Q92610 1267 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 PSKH2Q96QS6 385 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 IER2Q9BTL4 223 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 BRD8Q9H0E9 1235 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 USP29Q9HBJ7 922 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 CD93Q9NPY3 652 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 PRMT8Q9NR22 394 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 RBM22Q9NW64 420 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 SEPT3Q9UH03 358 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 EVLQ9UI08 416 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-209ENST00000469852 SARDHQ9UL12 918 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 WASF2Q9Y6W5 498 aa15.01□□□□□ -0.01
COL9A3-209ENST00000469852 EML5Q05BV3 1969 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 BCLAF3A2AJT9 711 aaKnown RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 TDGF1P13385 188 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 NDUFV2P19404 249 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 CR2P20023 1033 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 CD68P34810 354 aaPredicted RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 DGKEP52429 567 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 STARD3Q14849 445 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms