RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RRN3Q9NYV6 651 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 SUFUQ9UMX1 484 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 RGS14O43566 566 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 LDB2O43679 373 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 CHRM4P08173 479 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 SNHG28P0DPA3 235 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 HOXA11P31270 313 aaPredicted RBP5.71□□□□□ -1.5
XRN1-207ENST00000468894 RFC1P35251 1148 aaPredicted RBP5.71□□□□□ -1.5
XRN1-207ENST00000468894 THBS3P49746 956 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 ENTPD1P49961 510 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 CDH12P55289 794 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 ZP1P60852 638 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 SLC18A2Q05940 514 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 MAPK7Q13164 816 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 GPS2Q13227 327 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 TAF12Q16514 161 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 TMEM95Q3KNT9 176 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 WDR45BQ5MNZ6 344 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 UBAP2Q5T6F2 1119 aaKnown RBP5.71□□□□□ -1.5
XRN1-207ENST00000468894 CPXCR1Q8N123 301 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 SH3KBP1Q96B97 665 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 LHPPQ9H008 270 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 EPHX3Q9H6B9 360 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 CATSPERBQ9H7T0 1116 aa5.71□□□□□ -1.5
XRN1-207ENST00000468894 A0A1B0GVT2 93 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 FAM90A8PA6NJQ4 464 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 FAM157AC9JC47 383 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 INAFM1C9JVW0 142 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 PER2O15055 1255 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 SMAD6O43541 496 aaKnown RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 SPRY3O43610 288 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 IL1AP01583 271 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 MMP3P08254 477 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 FAM90A13PP0C7W8 464 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 FAM90A24PP0C7X0 464 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 GNLYP22749 145 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 CNTFP26441 200 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 THPOP40225 353 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 PPM1FP49593 454 aaPredicted RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 ARSFP54793 590 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 ROR2Q01974 943 aaKnown RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 TBL3Q12788 808 aaKnown RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 RAPGEF1Q13905 1077 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 TMC8Q8IU68 726 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 ZDHHC17Q8IUH5 632 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 EXOC8Q8IYI6 725 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 HSPH1Q92598 858 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 CNOT9Q92600 299 aaKnown RBP5.7□□□□□ -1.5
XRN1-207ENST00000468894 TAOK3Q9H2K8 898 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 ENTPD7Q9NQZ7 604 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 GGA3Q9NZ52 723 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 HSF4Q9ULV5 492 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 CNPY2Q9Y2B0 182 aa5.7□□□□□ -1.5
XRN1-207ENST00000468894 NCAM2O15394 837 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 ENO3P13929 434 aaPredicted RBP5.69□□□□□ -1.5
XRN1-207ENST00000468894 CTPS1P17812 591 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 DCTDP32321 178 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 PMS2P54278 862 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 HNF4GQ14541 408 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 RETSATQ6NUM9 610 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 ZNF517Q6ZMY9 492 aaPredicted RBP5.69□□□□□ -1.5
XRN1-207ENST00000468894 ZNF367Q7RTV3 350 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 ZNF354CQ86Y25 554 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 DNAAF1Q8NEP3 725 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 RFWD2Q8NHY2 731 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 SLC35F5Q8WV83 523 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 MIB2Q96AX9 1013 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 ELP4Q96EB1 424 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 SF3B5Q9BWJ5 86 aaKnown RBP5.69□□□□□ -1.5
XRN1-207ENST00000468894 ALKBH4Q9NXW9 302 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 FZD10Q9ULW2 581 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 PCDHA7Q9UN72 937 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 PTGDR2Q9Y5Y4 395 aa5.69□□□□□ -1.5
XRN1-207ENST00000468894 A0A096LPK6 155 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 MS4A18H0YCH9 400 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 LIASO43766 372 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 KIF1CO43896 1103 aaKnown RBP5.68□□□□□ -1.5
XRN1-207ENST00000468894 POLBP06746 335 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 CDC25AP30304 524 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 GPR12P47775 334 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 NAA25Q14CX7 972 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 DNTTIP2Q5QJE6 756 aaKnown RBP5.68□□□□□ -1.5
XRN1-207ENST00000468894 OTUD1Q5VV17 481 aaPredicted RBP5.68□□□□□ -1.5
XRN1-207ENST00000468894 C17orf99Q6UX52 265 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 FAM83HQ6ZRV2 1179 aaPredicted RBP5.68□□□□□ -1.5
XRN1-207ENST00000468894 MON1AQ86VX9 555 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 TEX45Q8NA69 505 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 TMEM163Q8TC26 289 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 TMEM170AQ8WVE7 144 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 MARK4Q96L34 752 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 CD180Q99467 661 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 EYA3Q99504 573 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 GPR63Q9BZJ6 419 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 DCLK3Q9C098 648 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 SLC32A1Q9H598 525 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 MVB12BQ9H7P6 319 aa5.68□□□□□ -1.5
XRN1-207ENST00000468894 MYO6Q9UM54 1294 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms