RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SIX1Q15475 284 aaPredicted RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 SLC45A4Q5BKX6 768 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 CARD16Q5EG05 197 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 KIAA1211LQ6NV74 962 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 Q6ZVU0 165 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 ZC3H18Q86VM9 953 aaKnown RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 C1orf210Q8IVY1 113 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 ZNF366Q8N895 744 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 TSTD1Q8NFU3 115 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 SLC35B2Q8TB61 432 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 C2orf42Q9NWW7 574 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 LHX3Q9UBR4 397 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 FARP1Q9Y4F1 1045 aaPredicted RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 BCLAF3A2AJT9 711 aaKnown RBP16.25■□□□□ 0.19
GPC1-207ENST00000466624 PGRMC1O00264 195 aaKnown RBP16.25■□□□□ 0.19
GPC1-207ENST00000466624 LAMTOR5O43504 91 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 IGSF6O95976 241 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 MMP13P45452 471 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 COPAP53621 1224 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 CCNG2Q16589 344 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 ALG1LQ6GMV1 187 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 DRICH1Q6PGQ1 229 aaPredicted RBP16.25■□□□□ 0.19
GPC1-207ENST00000466624 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 RASSF3Q86WH2 238 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 OR8D1Q8WZ84 308 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 LRIG1Q96JA1 1093 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 GDAP1L1Q96MZ0 367 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 VAT1Q99536 393 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 MGME1Q9BQP7 344 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 RSPH9Q9H1X1 276 aaPredicted RBP16.25■□□□□ 0.19
GPC1-207ENST00000466624 MTG2Q9H4K7 406 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 HOMER3Q9NSC5 361 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 RNF14Q9UBS8 474 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
GPC1-207ENST00000466624 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
GPC1-207ENST00000466624 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 TCRBV21S2A2A0A5A6 115 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 H7C0C1 242 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 K7ESF4 209 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 APBB3O95704 486 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 VAV1P15498 845 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 MAPK8P45983 427 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 ATP5OP48047 213 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 CCNHP51946 323 aaPredicted RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 ZBTB16Q05516 673 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 GRM3Q14832 879 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 HEATR6Q6AI08 1181 aaKnown RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 DPY19L3Q6ZPD9 716 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 TSEN2Q8NCE0 465 aaKnown RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 TMIEQ8NEW7 156 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 HTR3CQ8WXA8 447 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 NKD2Q969F2 451 aaPredicted RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 FAM129BQ96TA1 746 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 LRFN3Q9BTN0 628 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 CPEB1Q9BZB8 566 aaKnown RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 TM6SF2Q9BZW4 377 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 POLR3BQ9NW08 1133 aaPredicted RBP16.24■□□□□ 0.19
GPC1-207ENST00000466624 EBF1Q9UH73 591 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 ATP8A1Q9Y2Q0 1164 aa16.24■□□□□ 0.19
GPC1-207ENST00000466624 KCNK1O00180 336 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 LIASO43766 372 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 POP4O95707 220 aaKnown RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 PRNPP04156 253 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 TDGF1P13385 188 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 GABRG2P18507 467 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 CR2P20023 1033 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 CES1P23141 567 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 CHRNA3P32297 505 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 AP1S1P61966 158 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 RAD51Q06609 339 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 OASLQ15646 514 aaKnown RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 TEX44Q53QW1 395 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 ZNF776Q68DI1 518 aaPredicted RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 MAML2Q8IZL2 1156 aaPredicted RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 STK40Q8N2I9 435 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 LRRN4Q8WUT4 740 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 ZNF419Q96HQ0 510 aaPredicted RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 MS4A14Q96JA4 679 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 MRGPRX1Q96LB2 322 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 HEPHQ9BQS7 1158 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 POLR1EQ9GZS1 481 aaKnown RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 MKRN2Q9H000 416 aaKnown RBP16.23■□□□□ 0.19
GPC1-207ENST00000466624 RBM22Q9NW64 420 aaKnown RBP eCLIP16.23■□□□□ 0.19
GPC1-207ENST00000466624 HECAQ9UBI9 543 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms