RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 LATO43561 262 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 MFAP3LO75121 409 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 LEFTY1O75610 366 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 PRNPP04156 253 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 CSNK1EP49674 416 aaKnown RBP22.56■■□□□ 1.2
UBA3-206ENST00000464605 CCNHP51946 323 aaPredicted RBP22.56■■□□□ 1.2
UBA3-206ENST00000464605 PIGHQ14442 188 aaPredicted RBP22.56■■□□□ 1.2
UBA3-206ENST00000464605 UAP1L1Q3KQV9 507 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 PARP15Q460N3 678 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 KCNT1Q5JUK3 1230 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 KDM4CQ9H3R0 1056 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 CWC15Q9P013 229 aaKnown RBP22.56■■□□□ 1.2
UBA3-206ENST00000464605 ANAPC7Q9UJX3 599 aa22.56■■□□□ 1.2
UBA3-206ENST00000464605 A0A1B0GVT2 93 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 KPNA3O00505 521 aaPredicted RBP22.55■■□□□ 1.2
UBA3-206ENST00000464605 WNT9AO14904 365 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 ERCC2P18074 760 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 HCAR3P49019 387 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 AFF3P51826 1226 aaKnown RBP22.55■■□□□ 1.2
UBA3-206ENST00000464605 GEMIN4P57678 1058 aaKnown RBP22.55■■□□□ 1.2
UBA3-206ENST00000464605 SHC2P98077 582 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 DPYSL2Q16555 572 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 AFMIDQ63HM1 303 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 PSAPL1Q6NUJ1 521 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 RFX8Q6ZV50 586 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 NETO2Q8NC67 525 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 GRIN3AQ8TCU5 1115 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 HEPHQ9BQS7 1158 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 TM6SF2Q9BZW4 377 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 ZDHHC5Q9C0B5 715 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 SLC39A8Q9C0K1 460 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 HECAQ9UBI9 543 aaPredicted RBP22.55■■□□□ 1.2
UBA3-206ENST00000464605 IP6K2Q9UHH9 426 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 ANGPTL2Q9UKU9 493 aa22.55■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3DA0A087WVF3 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3IA0A087WXS9 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3EA0A087X179 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3KA0A087X1G2 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3FA6NER0 549 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 ZSCAN5CA6NGD5 496 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3LB9A6J9 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 BUB1O43683 1085 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3HP0C7X1 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 RARAP10276 462 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 GKP32189 559 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 RECQLP46063 649 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 GRIA4P48058 902 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 DNA2P51530 1060 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 NDST2P52849 883 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 ATXN3P54252 364 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 SLC25A11Q02978 314 aaKnown RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 DPYSQ14117 519 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 SMTNL2Q2TAL5 461 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 BOLA3Q53S33 107 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 INO80DQ53TQ3 878 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 PPP6R3Q5H9R7 873 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3GQ6DHY5 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3CQ6IPX1 549 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 LAYNQ6UX15 382 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 PIP4P1Q86T03 277 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 CPNE8Q86YQ8 564 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 ARHGAP12Q8IWW6 846 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TBC1D3Q8IZP1 549 aaPredicted RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 CELF6Q96J87 481 aaKnown RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 HDAC8Q9BY41 377 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 RBSNQ9H1K0 784 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 PDFQ9HBH1 243 aa22.54■■□□□ 1.2
UBA3-206ENST00000464605 TPRP12270 2363 aaKnown RBP22.54■■□□□ 1.2
UBA3-206ENST00000464605 LRRK1Q38SD2 2015 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 ACACBO00763 2458 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 ARID1BQ8NFD5 2236 aaPredicted RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 UPK3BL1B0FP48 263 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 UPK3BL2E5RIL1 263 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 GIPC1O14908 333 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 OPHN1O60890 802 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 TMCC1O94876 653 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 GSRP00390 522 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 CD59P13987 128 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 CSRP1P21291 193 aaKnown RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 NOVA1P51513 510 aaKnown RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 RACK1P63244 317 aaKnown RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 KIF19Q2TAC6 998 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 ERN2Q76MJ5 926 aaKnown RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 TRIM69Q86WT6 500 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 NPWQ8N729 165 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 OR2AP1Q8NGE2 309 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 ZNF564Q8TBZ8 553 aaPredicted RBP22.53■■□□□ 1.2
UBA3-206ENST00000464605 SLC6A18Q96N87 628 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 IL21RQ9HBE5 538 aa22.53■■□□□ 1.2
UBA3-206ENST00000464605 A0A1W2PR77 199 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 J3KR12 359 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 WNT1P04628 370 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 PAPOLAP51003 745 aaKnown RBP22.52■■□□□ 1.2
UBA3-206ENST00000464605 ZNF135P52742 658 aaPredicted RBP22.52■■□□□ 1.2
UBA3-206ENST00000464605 CYTH1Q15438 398 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 HLA-BQ31612 363 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 ATXN7L2Q5T6C5 722 aaPredicted RBP22.52■■□□□ 1.2
UBA3-206ENST00000464605 POLNQ7Z5Q5 900 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 GAS2L3Q86XJ1 694 aa22.52■■□□□ 1.2
UBA3-206ENST00000464605 ZNF354CQ86Y25 554 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms