RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 IGFBP4P22692 258 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 S100A1P23297 94 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 IL1R2P27930 398 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RBL1P28749 1068 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ARL4AP40617 200 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZNF135P52742 658 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 LIMK2P53671 638 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 MRPS22P82650 360 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 PTPN11Q06124 597 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 IFRD2Q12894 506 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 BNIP2Q12982 314 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 IKBKEQ14164 716 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SQLEQ14534 574 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 C16orf72Q14CZ0 275 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 PDK1Q15118 436 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 CYTH1Q15438 398 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RGS21Q2M5E4 152 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 MGAT5BQ3V5L5 792 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SUPT20HL1Q3ZLR7 823 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 INTS11Q5TA45 600 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 IER5Q5VY09 327 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TXNRD3NBQ6F5E7 133 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TTC33Q6PID6 262 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RNF111Q6ZNA4 994 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 FAM196AQ6ZSG2 479 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZCCHC23Q6ZST2 131 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 KRT27Q7Z3Y8 459 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RAB44Q7Z6P3 723 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RSPH3Q86UC2 560 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 GPR180Q86V85 440 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 VSIG10LQ86VR7 867 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 NT5DC4Q86YG4 428 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 AQP12AQ8IXF9 295 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ANKRD13AQ8IZ07 590 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SIX6OS1Q8N1H7 587 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TTC30BQ8N4P2 665 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 WDTC1Q8N5D0 677 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SCAIQ8N9R8 606 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 MFSD2AQ8NA29 543 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ANKRD52Q8NB46 1076 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 GIPC3Q8TF64 312 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 POP5Q969H6 163 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZUFSPQ96AP4 578 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 EFHD2Q96C19 240 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ROPN1LQ96C74 230 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ACSF2Q96CM8 615 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 MASTLQ96GX5 879 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 LENG8Q96PV6 779 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TCF12Q99081 682 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 RBBP8Q99708 897 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 HNRNPABQ99729 332 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC25A23Q9BV35 468 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TDRD1Q9BXT4 1180 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 BCO2Q9BYV7 579 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ADAMTS10Q9H324 1103 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 CAAP1Q9H8G2 361 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 NMRAL1Q9HBL8 299 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZBTB26Q9HCK0 441 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SPAG4Q9NPE6 437 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 PNPOQ9NVS9 261 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 BFARQ9NZS9 450 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 SAE1Q9UBE0 346 aaPredicted RBP7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 TUBGCP4Q9UGJ1 667 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 EMCNQ9ULC0 261 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 ZNF711Q9Y462 761 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 PCDHAC2Q9Y5I4 1007 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 HEY1Q9Y5J3 304 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 UBR3Q6ZT12 1888 aa7.3□□□□□ -1.24
CLSTN1-204ENST00000464286 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 IQCA1LA6NCM1 817 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 H3BSA7 217 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 M0QYV0 167 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 NCAM2O15394 837 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 AVILO75366 819 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 SUPT3HO75486 399 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 LYPLA1O75608 230 aaPredicted RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 SRP72O76094 671 aaKnown RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 VAPBO95292 243 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ATG7O95352 703 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 CALCAP01258 141 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ALDOAP04075 364 aaKnown RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 GYS1P13807 737 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ENO3P13929 434 aaPredicted RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 MYF6P23409 242 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 PTPN9P43378 593 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ASPAP45381 313 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 NPY2RP49146 381 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 TMED10P49755 219 aaKnown RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ATP4BP51164 291 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 THOP1P52888 689 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 TMBIM6P55061 237 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 ACTR2P61160 394 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 PSME3P61289 254 aa7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 RPS6P62753 249 aaKnown RBP7.29□□□□□ -1.24
CLSTN1-204ENST00000464286 MPP1Q00013 466 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms