RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 FNIP1Q8TF40 1166 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CAPSLQ8WWF8 208 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CD101Q93033 1021 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TARS2Q9BW92 718 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 FBXO28Q9NVF7 368 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 PCDHA3Q9Y5H8 950 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 MSCO60682 206 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 RPA3P35244 121 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 GP5P40197 560 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 MMP13P45452 471 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 STARP49675 285 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 ADARB2Q9NS39 739 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 ADAM28Q9UKQ2 775 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CORO1CQ9ULV4 474 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SNCAIPQ9Y6H5 919 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 NFIXQ14938 502 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CDKAL1Q5VV42 579 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 ARMC8Q8IUR7 673 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 GDPD5Q8WTR4 605 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 DGCR14Q96DF8 476 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 POLR1EQ9GZS1 481 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CCNB1IP1Q9NPC3 277 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 WBP11Q9Y2W2 641 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 RIC1Q4ADV7 1423 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CACNA2D1P54289 1103 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 DDR1Q08345 913 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 RUNDC3AQ59EK9 446 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 IZUMO2Q6UXV1 221 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 DEFB107AQ8IZN7 70 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SH2D3CQ8N5H7 860 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TEX47Q8TBZ9 253 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TEKT5Q96M29 485 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 KCNS3Q9BQ31 491 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SENP6Q9GZR1 1112 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 RNPEPL1Q9HAU8 725 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 HPSEQ9Y251 543 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 A0A1W2PQ72 361 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 IFNA16P05015 189 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 PON1P27169 355 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 GSTT1P30711 240 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 OMPP47874 163 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 CPA2P48052 419 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TTPAP49638 278 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 NME5P56597 212 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 PTPN11Q06124 597 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 BICRALQ6AI39 1079 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 ARL15Q9NXU5 204 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 EHD3Q9NZN3 535 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 ERGIC3Q9Y282 383 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 GMPSP49915 693 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 PPIDQ08752 370 aaKnown RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SQLEQ14534 574 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 RFTN2Q52LD8 501 aaPredicted RBP8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 HYIQ5T013 277 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TRIM74Q86UV6 250 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 TRIM73Q86UV7 250 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 COLGALT1Q8NBJ5 622 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SYT15Q9BQS2 421 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 SPATA9Q9BWV2 254 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
SHROOM4-203ENST00000460112 A0A1W2PRG6 482 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 MANSC4A6NHS7 340 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 AXIN1O15169 862 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 PROSCO94903 275 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 IGFALSP35858 605 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 UGT2B15P54855 530 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 AMHR2Q16671 573 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 HTR3CQ8WXA8 447 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 CXorf40BQ96DE9 158 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 OXNAD1Q96HP4 312 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 KLF6Q99612 283 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 THAP2Q9H0W7 228 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 CYP4F12Q9HCS2 524 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 MON2Q7Z3U7 1717 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 CNTNAP5Q8WYK1 1306 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 NFAT5O94916 1531 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 SIN3BO75182 1162 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 ALADP13716 330 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 AMD1P17707 334 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 CHN2P52757 468 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 CCNIQ14094 377 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 FAM171BQ6P995 826 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 AFTPHQ6ULP2 937 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 PTAR1Q7Z6K3 402 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 TMC8Q8IU68 726 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 IL22Q9GZX6 179 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 JMJD4Q9H9V9 463 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 GPN1Q9HCN4 374 aaPredicted RBP8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 ABI3Q9P2A4 366 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 SLC27A6Q9Y2P4 619 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 ASXL3Q9C0F0 2248 aa8.98□□□□□ -0.97
SHROOM4-203ENST00000460112 IDH3BO43837 385 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms