RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 NHLH1Q02575 133 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CYTH1Q15438 398 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 TTC31Q49AM3 519 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 RCOR2Q8IZ40 523 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 OR2AP1Q8NGE2 309 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 ISG20Q96AZ6 181 aaKnown RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 SPACA7Q96KW9 195 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CCDC114Q96M63 670 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 GDAP1L1Q96MZ0 367 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CACNA1HO95180 2353 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 SPAG17Q6Q759 2223 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 A0A1W2PP55 124 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 PLK4O00444 970 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 MCF2LO15068 1137 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 HRO43593 1189 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 IGSF6O95976 241 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 ADH1BP00325 375 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 IL1BP01584 269 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 DNTTP04053 509 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 DRD3P35462 400 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 NBL1P41271 181 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 RECQLP46063 649 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 TPMTP51580 245 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 COPS2P61201 443 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 SLC20A2Q08357 652 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 TFDP2Q14188 446 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF235Q14590 738 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 LBRQ14739 615 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 B4GALNT4Q76KP1 1039 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 DSG4Q86SJ6 1040 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 METTL3Q86U44 580 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 FAM124AQ86V42 546 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 PGBD5Q8N414 524 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 TSEN2Q8NCE0 465 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 PIP4K2CQ8TBX8 421 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF599Q96NL3 588 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 LGMNQ99538 433 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 MAK16Q9BXY0 300 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 EPC1Q9H2F5 836 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
COL18A1-206ENST00000459895 SMG5Q9UPR3 1016 aaKnown RBP13.03□□□□□ -0.32
COL18A1-206ENST00000459895 C1QTNF3-AMACRE9PGA6 284 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 KRIT1O00522 736 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 INSIG1O15503 277 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ZBTB24O43167 697 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 LEFTY1O75610 366 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 PIGNO95427 931 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 IGLV3-19P01714 112 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 APOC2P02655 101 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ACADMP11310 421 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ZFXP17010 805 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 MX2P20592 715 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 CHRNA3P32297 505 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 MMP13P45452 471 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 SNRPD1P62314 119 aaKnown RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ZBTB16Q05516 673 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 RFTN1Q14699 578 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 LPAL2Q16609 132 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 PRR23BQ6ZRT6 265 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 SLC35F6Q8N357 371 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 MAML1Q92585 1016 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 ARRDC3Q96B67 414 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 MGME1Q9BQP7 344 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 TLR10Q9BXR5 811 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 HECAQ9UBI9 543 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 SEPT3Q9UH03 358 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
COL18A1-206ENST00000459895 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 FRYLO94915 3013 aa13.02□□□□□ -0.33
COL18A1-206ENST00000459895 THADAQ6YHU6 1953 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 TCRBV7S2A1N4TA0A589 114 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms