RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CHRDQ9H2X0 955 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 NT5MQ9NPB1 228 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 PRSS16Q9NQE7 514 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 RBM22Q9NW64 420 aaKnown RBP eCLIP12.05□□□□□ -0.483e-6■■■□□ 19
RCL1-208ENST00000448872 MMP17Q9ULZ9 603 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 TTLL3Q9Y4R7 772 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 BCLAF3A2AJT9 711 aaKnown RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 CHURC1-FNTBB4DL54 471 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 TUBB4AP04350 444 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 HOXB2P14652 356 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 NNMTP40261 264 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 RHOAP61586 193 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 IFI35P80217 286 aaPredicted RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 HNRNPDQ14103 355 aaKnown RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 ZNF235Q14590 738 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 IHHQ14623 411 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 RFTN1Q14699 578 aaPredicted RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 HEATR6Q6AI08 1181 aaKnown RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 DPY19L3Q6ZPD9 716 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 CACUL1Q86Y37 369 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 STK40Q8N2I9 435 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 KDM1BQ8NB78 822 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 KIF18AQ8NI77 898 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 MAIP1Q8WWC4 291 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 FATE1Q969F0 183 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 MAGOHBQ96A72 148 aaKnown RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 PSKH2Q96QS6 385 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 NAP1L3Q99457 506 aaPredicted RBP12.04□□□□□ -0.48
RCL1-208ENST00000448872 IL12RB2Q99665 862 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 CEP44Q9C0F1 390 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 BRD8Q9H0E9 1235 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 SEPT3Q9UH03 358 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 CDC23Q9UJX2 597 aa12.04□□□□□ -0.48
RCL1-208ENST00000448872 CXorf51AA0A1B0GTR3 108 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 ZBTB24O43167 697 aaPredicted RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 CTSLP07711 333 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 ZSCAN5DPP0CG00 497 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 ETS1P14921 441 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 RPS9P46781 194 aaKnown RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 RENBPP51606 427 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 METAP1P53582 386 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 SATB1Q01826 763 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 ZNF33AQ06730 810 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 ITKQ08881 620 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 NIPAL4Q0D2K0 466 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 CRY1Q16526 586 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 CYP1B1Q16678 543 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 CARD16Q5EG05 197 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 EOGTQ5NDL2 527 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 TRMT11Q7Z4G4 463 aaKnown RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 ZNF567Q8N184 647 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 RYBPQ8N488 228 aaPredicted RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 PCDH20Q8N6Y1 951 aaKnown RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 CCDC110Q8TBZ0 833 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 CASKIN2Q8WXE0 1202 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 FAM129BQ96TA1 746 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 MGME1Q9BQP7 344 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 FRMD8P1Q9BZ68 369 aaPredicted RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 DDX47Q9H0S4 455 aaKnown RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 EVLQ9UI08 416 aaPredicted RBP12.03□□□□□ -0.48
RCL1-208ENST00000448872 ZNF148Q9UQR1 794 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 MYO10Q9HD67 2058 aa12.03□□□□□ -0.48
RCL1-208ENST00000448872 EDDM13A0A1B0GTR0 161 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 NPC1O15118 1278 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 SYNCRIPO60506 623 aaKnown RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 PHF2O75151 1096 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 ITGAVP06756 1048 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 COILP38432 576 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 PAFAH1B1P43034 410 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 SCNN1BP51168 640 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 CLCN5P51795 746 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 COPAP53621 1224 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 MRPS25P82663 173 aaKnown RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 DSC2Q02487 901 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 C2orf54Q08AI8 447 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 MYLK3Q32MK0 819 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 POM121L1PQ3SYA9 428 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 TEX44Q53QW1 395 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 SYT13Q7L8C5 426 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 KLHL7Q8IXQ5 586 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 TAB3Q8N5C8 712 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 C12orf50Q8NA57 414 aaPredicted RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 OR2AP1Q8NGE2 309 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 CCDC26Q8TAB7 109 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 ISG20Q96AZ6 181 aaKnown RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 TEKT5Q96M29 485 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 CCDC114Q96M63 670 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 HHIPQ96QV1 700 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms